Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AC009643.1-201ENST00000532030 391 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AL121576.1-201ENST00000556055 276 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 MTND2P13-201ENST00000577438 1039 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 MIR4277-201ENST00000578298 84 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AL137849.1-201ENST00000604767 169 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AC073530.2-201ENST00000623987 261 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AC103798.2-201ENST00000624292 632 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
TRIM49D1C9J1S8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC007390.2-201ENST00000606229 3803 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC011155.1-201ENST00000316512 456 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 MIR199A2-201ENST00000385289 110 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 RAB9AP4-201ENST00000415230 609 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AL691449.1-201ENST00000426570 421 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AL590623.1-201ENST00000427864 105 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AL365396.1-201ENST00000430854 671 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 RPL21P11-201ENST00000461458 483 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC037198.2-201ENST00000478845 733 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 PPIAP15-201ENST00000479662 484 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 NDUFA5P2-201ENST00000519723 344 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AP003730.1-201ENST00000524605 285 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC068446.3-201ENST00000555285 382 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 NPM1P47-201ENST00000560843 856 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 MIR3138-201ENST00000585238 82 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC020910.2-201ENST00000603635 610 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 ARF4P1-201ENST00000605447 541 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 MIR6758-201ENST00000620653 63 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 LINC00216-201ENST00000623548 1126 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC020978.9-201ENST00000624380 1141 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 CCT8P1-201ENST00000413611 1657 ntBASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TRIM49D1C9J1S8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 CASC19-261ENST00000641853 1638 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 RNU6-819P-201ENST00000364116 107 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AL138878.1-201ENST00000405131 347 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 RNU4-6P-201ENST00000410804 122 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 CYP4F29P-201ENST00000420685 446 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AL158073.1-201ENST00000426848 1104 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 C4BPAP2-201ENST00000428434 478 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 MRPS33P4-201ENST00000434892 317 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC009263.1-201ENST00000441193 1239 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 CASP3P1-201ENST00000446037 609 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 EIF2S2P2-201ENST00000447161 982 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC106806.2-201ENST00000509365 500 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 RAC1P2-201ENST00000511164 579 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC008802.1-201ENST00000519121 791 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC092868.3-201ENST00000560515 784 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms