Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TBC1D3FA6NER0 AC010300.1-201ENST00000600671 5134 ntBASIC4.82□□□□□ -1.64
TBC1D3FA6NER0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TBC1D3FA6NER0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TBC1D3FA6NER0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
TBC1D3FA6NER0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TBC1D3FA6NER0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 Z98755.1-201ENST00000407015 1384 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 MFSD8-216ENST00000641147 4009 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 RNA5SP332-201ENST00000391063 115 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 RSL24D1P4-201ENST00000400938 484 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 RPS3AP23-201ENST00000401762 784 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 RNU6-272P-201ENST00000411028 104 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC092162.1-201ENST00000432828 434 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 MTND1P32-201ENST00000433043 938 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 SEPT7P5-201ENST00000434048 306 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 SETP8-201ENST00000435341 628 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 USP9YP22-201ENST00000438971 294 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC004865.1-201ENST00000442276 1003 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 Z83846.1-201ENST00000446798 265 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 RPL7P59-201ENST00000447700 943 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 ATG12P2-201ENST00000456830 416 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 UBA52P3-201ENST00000491303 382 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC011352.3-201ENST00000505162 593 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC048346.1-201ENST00000510247 144 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 NDUFB4P12-201ENST00000513465 390 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 HIGD1AP6-201ENST00000521833 279 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 MTND2P26-201ENST00000528255 1029 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC087465.1-201ENST00000560574 245 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC093591.2-201ENST00000565254 3843 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC008088.1-201ENST00000580993 280 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 BNIP3P26-201ENST00000600827 554 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC068790.4-201ENST00000602474 263 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC012414.7-202ENST00000622705 1090 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC067852.7-201ENST00000623270 535 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC073869.10-201ENST00000642016 354 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 AC092162.3-201ENST00000624511 1624 ntBASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TBC1D3FA6NER0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 AC012321.1-201ENST00000561622 1588 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 OR5H2-201ENST00000355273 945 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 RNU4-40P-201ENST00000364351 143 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 RNU6-157P-201ENST00000383957 107 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 RNA5SP80-201ENST00000410475 111 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 GSTM3P2-201ENST00000412746 530 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 RPL7P53-201ENST00000421245 739 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 FABP7P1-201ENST00000424004 391 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 RPS17P8-201ENST00000434525 335 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 RPS26P40-201ENST00000435209 294 ntBASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.8□□□□□ -1.64
TBC1D3FA6NER0 RPL7AP61-201ENST00000443410 636 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms