Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 ARL4AP1-201ENST00000503220 705 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 MRPS33P3-201ENST00000513456 322 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RN7SKP276-201ENST00000516242 268 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 BGLT3-201ENST00000564523 994 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AP005262.1-201ENST00000582646 997 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC091178.1-203ENST00000584586 279 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RPL7P50-201ENST00000600588 727 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AL137072.1-201ENST00000603444 466 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AL031320.1-201ENST00000604177 357 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC080013.3-201ENST00000606839 578 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AP002360.3-201ENST00000607673 710 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AP003399.1-201ENST00000637534 361 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 MAPK10-303ENST00000641324 3959 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AP000542.2-201ENST00000623199 6179 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 RN7SKP269-201ENST00000365545 319 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 MIR217-201ENST00000384817 110 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 RNU2-65P-201ENST00000410162 185 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 PAICSP7-201ENST00000419829 962 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 RPL7P53-201ENST00000421245 739 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AL365338.1-201ENST00000422282 858 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC104978.1-201ENST00000449387 391 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 NPM1P39-201ENST00000449818 867 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 Z99714.1-201ENST00000450463 807 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 SCARNA10-201ENST00000459255 330 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 RPL5P24-201ENST00000463742 885 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC090013.1-201ENST00000485147 480 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 RN7SL591P-201ENST00000496150 292 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 DYNLL1P6-201ENST00000503440 264 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 MTCYBP16-201ENST00000509187 1129 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC008837.2-201ENST00000513076 418 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC008494.2-201ENST00000514544 370 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 RPS27AP18-201ENST00000515536 459 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 RNU6-347P-201ENST00000516658 105 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AP000619.3-201ENST00000535634 1127 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AL110118.1-201ENST00000553543 400 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC002400.1-201ENST00000569310 726 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC069304.3-201ENST00000603938 1084 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AC133644.2-201ENST00000608142 540 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 MIR4278-201ENST00000636094 69 ntBASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TCRBV7S3A2A0A539 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.65□□□□□ -1.66
TCRBV7S3A2A0A539 AC017104.4-201ENST00000636283 1592 ntBASIC4.65□□□□□ -1.66
TCRBV7S3A2A0A539 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
TCRBV7S3A2A0A539 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TCRBV7S3A2A0A539 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TCRBV7S3A2A0A539 AC010928.1-201ENST00000592477 1447 ntBASIC4.65□□□□□ -1.66
TCRBV7S3A2A0A539 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms