Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 OR8G5-201ENST00000524943 1041 ntBASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 MTCO3P22-201ENST00000603219 784 ntBASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AL133247.2-201ENST00000603236 482 ntBASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 AC008013.2-202ENST00000637965 364 ntBASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RHBDD3Q9Y3P4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 RPL7P32-201ENST00000457119 744 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 RN7SL98P-201ENST00000462271 300 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 TMED11P-201ENST00000479478 690 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 RN7SL205P-201ENST00000490174 284 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 RN7SL810P-201ENST00000493031 276 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AP001086.1-201ENST00000494882 321 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC017037.1-201ENST00000508460 471 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 PTGES3P3-201ENST00000511479 482 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC010476.1-201ENST00000519111 851 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC068831.4-201ENST00000556118 109 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AP000919.1-202ENST00000581139 1264 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC007687.1-201ENST00000602704 304 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC073111.2-201ENST00000605657 1075 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 RN7SL722P-201ENST00000617780 284 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 RN7SL565P-201ENST00000618246 284 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AP000346.3-201ENST00000622821 210 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 AC140479.6-201ENST00000633535 357 ntBASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RHBDD3Q9Y3P4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC066616.2-201ENST00000559334 1481 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 EXOC5P1-201ENST00000510543 1969 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 RNA5SP447-201ENST00000363749 119 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 RANP4-201ENST00000413361 655 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 GSTA7P-201ENST00000438425 448 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 ARL5AP2-201ENST00000444698 533 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 TPTE2P6-202ENST00000445572 1007 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 HMGN2P21-201ENST00000447764 270 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 RPL29P29-201ENST00000448725 423 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 RPS29P33-201ENST00000456717 146 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 snoU13.1-201ENST00000459157 104 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 RPL23AP71-201ENST00000470966 469 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 RPS29P22-201ENST00000472363 168 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC068305.1-201ENST00000497406 726 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 COX6B1P6-201ENST00000522347 255 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AP004242.1-201ENST00000533701 349 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC007448.1-201ENST00000582714 234 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC234771.5-201ENST00000600161 514 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 AC008536.1-201ENST00000602872 669 ntBASIC3.67□□□□□ -1.82
RHBDD3Q9Y3P4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms