Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC108751.2-201ENST00000469993 231 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 MRPS33P2-201ENST00000507850 322 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 OR4A2P-201ENST00000527276 913 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 MTND4P33-201ENST00000556706 766 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC009094.1-201ENST00000564443 426 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 RN7SL176P-201ENST00000580352 264 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC090312.2-201ENST00000582687 378 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC021171.1-201ENST00000603137 706 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 MTND3P19-201ENST00000603825 345 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 ELOCP34-201ENST00000604436 327 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 VN1R74P-201ENST00000613259 503 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC013470.4-201ENST00000619978 986 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 MIR6810-201ENST00000622701 70 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC016717.3-201ENST00000624730 554 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AL121594.5-201ENST00000631724 573 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC104446.1-201ENST00000613728 1321 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 SNORA62-201ENST00000365493 153 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AL049545.1-201ENST00000401856 572 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 GSTM3P2-201ENST00000412746 530 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC234782.4-201ENST00000417646 1048 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 MTND4P3-201ENST00000417829 541 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC234781.3-201ENST00000452540 973 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC244505.3-201ENST00000454598 187 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 RPS5P7-201ENST00000456664 608 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 RPL23AP71-201ENST00000470966 469 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 RPL23AP72-201ENST00000492447 435 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 IGBP1P5-201ENST00000507524 1000 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC134698.5-201ENST00000519444 336 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC124293.1-201ENST00000530034 493 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC022882.1-201ENST00000532142 501 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC007834.2-201ENST00000536310 343 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 OSBPL9P5-201ENST00000542581 171 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 ZNF321P-202ENST00000550843 495 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 MIR5096-201ENST00000583713 70 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 SNORD91B-202ENST00000608459 222 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 MIR378J-201ENST00000611988 109 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC243654.2-201ENST00000612843 443 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC023509.5-201ENST00000617434 807 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC017037.3-201ENST00000625016 472 ntBASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NCKIPSDQ9NZQ3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NCKIPSDQ9NZQ3 AP000756.2-201ENST00000624168 2567 ntBASIC4.8□□□□□ -1.64
NCKIPSDQ9NZQ3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NCKIPSDQ9NZQ3 MFSD8-216ENST00000641147 4009 ntBASIC4.8□□□□□ -1.64
NCKIPSDQ9NZQ3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCKIPSDQ9NZQ3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NCKIPSDQ9NZQ3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NCKIPSDQ9NZQ3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.8□□□□□ -1.64
NCKIPSDQ9NZQ3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 393.5 ms