Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RFPL1S-203ENST00000539579 330 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 TOMM20P2-201ENST00000540082 421 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 CBX3P5-201ENST00000552017 521 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AL049874.4-201ENST00000557593 255 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AC009303.3-201ENST00000591103 736 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AF230666.2-201ENST00000602328 725 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 MIR6798-201ENST00000612887 67 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 RMST_5.1-201ENST00000618704 126 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AL133370.2-201ENST00000619934 439 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AL139089.1-201ENST00000620372 975 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 ATE1-AS1-202ENST00000636460 506 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AP002001.2-201ENST00000529025 1469 ntBASIC3.91□□□□□ -1.78
TREX1Q9NSU2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.91□□□□□ -1.78
TREX1Q9NSU2 AC017007.4-201ENST00000503353 1352 ntBASIC3.9□□□□□ -1.78
TREX1Q9NSU2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
TREX1Q9NSU2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TREX1Q9NSU2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TREX1Q9NSU2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AC068538.1-201ENST00000376856 336 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 RPL21P65-201ENST00000406094 466 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 RPS7P7-201ENST00000463499 571 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 RPL23AP71-201ENST00000470966 469 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 RPS6P4-201ENST00000494693 758 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 HPRT1P1-201ENST00000509498 657 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AC010342.1-201ENST00000514047 877 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AL136295.6-201ENST00000610486 658 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AC073530.2-201ENST00000623987 261 ntBASIC3.9□□□□□ -1.79
TREX1Q9NSU2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TREX1Q9NSU2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC007685.1-201ENST00000329806 452 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 RPL32P3-201ENST00000359025 275 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 MIR141-201ENST00000384975 95 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 CYP4F29P-201ENST00000420685 446 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 H2AFZP6-201ENST00000444403 394 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC008802.1-201ENST00000519121 791 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC022790.1-201ENST00000522872 204 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AL133247.2-201ENST00000603236 482 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 MIR6748-201ENST00000610433 71 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 MIR486-1-201ENST00000612171 68 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC083809.1-201ENST00000615051 472 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AL590410.1-201ENST00000617925 333 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC112484.5-201ENST00000624189 228 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 AC100871.1-201ENST00000507871 1456 ntBASIC3.89□□□□□ -1.79
TREX1Q9NSU2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TREX1Q9NSU2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms