Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC087272.1-201ENST00000523624 533 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 MED28P5-201ENST00000528254 438 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AL352979.3-201ENST00000553515 247 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AL121834.1-201ENST00000572284 509 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC006130.2-201ENST00000586202 326 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 SUMO2P14-201ENST00000604488 293 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AP002360.3-201ENST00000607673 710 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 FAM27D1-201ENST00000612308 341 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC016957.2-201ENST00000616998 848 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC007546.1-201ENST00000619452 559 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 AC112484.5-201ENST00000624189 228 ntBASIC4.44□□□□□ -1.7
HPS4Q9NQG7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HPS4Q9NQG7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 IQCB2P-201ENST00000401788 1633 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 RNA5SP175-201ENST00000364275 119 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 RNU6-185P-201ENST00000384421 107 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 RPL31P52-201ENST00000407532 367 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 RNU4-74P-201ENST00000411280 161 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 SNORA84-201ENST00000459229 133 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 RPL21P129-201ENST00000491732 478 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC025459.1-201ENST00000504072 156 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC018797.3-201ENST00000513388 1241 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC099522.1-202ENST00000514718 367 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC004923.2-201ENST00000529649 369 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC027455.1-201ENST00000574104 594 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 CBX3P2-202ENST00000583365 535 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC115621.1-201ENST00000604653 858 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AL160290.3-201ENST00000604869 165 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC004775.1-201ENST00000607389 753 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 AC091905.2-201ENST00000623143 306 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 FP325313.1-201ENST00000638228 703 ntBASIC4.43□□□□□ -1.7
HPS4Q9NQG7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HPS4Q9NQG7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 XIAPP3-201ENST00000312918 795 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 RNA5SP130-201ENST00000364431 114 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 RNU4-31P-201ENST00000384211 141 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 MIR92A2-201ENST00000385299 75 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC010385.1-201ENST00000412374 256 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 GSTM3P2-201ENST00000412746 530 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC105402.1-201ENST00000413336 545 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC062016.2-201ENST00000420950 676 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 CDY14P-201ENST00000431260 1014 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 MRPL50P1-201ENST00000431951 384 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 RPEP2-201ENST00000432149 701 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 CDY12P-201ENST00000440679 1015 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC007000.2-201ENST00000442564 487 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 RPL34P26-201ENST00000445636 354 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 CDY13P-201ENST00000445813 1015 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 CDY23P-201ENST00000451661 1014 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 DDX39BP2-208ENST00000453923 258 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AL592156.1-201ENST00000508758 304 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 SAP18P1-201ENST00000512058 390 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms