Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 RPL37P3-201ENST00000456825 293 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 SNORD108-201ENST00000459332 71 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC091917.2-201ENST00000505002 744 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC104997.1-201ENST00000519761 717 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AL352979.3-201ENST00000553515 247 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC006116.5-201ENST00000591936 559 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 PCNAP1-202ENST00000595299 752 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 MIR6867-201ENST00000610636 67 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 AC026368.1-201ENST00000614934 690 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 RMST_9.1-201ENST00000619945 193 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 IQCB2P-201ENST00000401788 1633 ntBASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.3□□□□□ -1.72
TM9SF3Q9HD45 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 RNA5SP36-201ENST00000410197 133 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC004022.2-201ENST00000413824 193 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AL356095.1-201ENST00000417217 199 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 SKP1P3-201ENST00000429280 487 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 RPL23AP25-201ENST00000430973 463 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC105402.2-201ENST00000438503 358 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AL512326.1-201ENST00000443050 721 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 RPL23AP2-201ENST00000471227 466 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 RPS6P4-201ENST00000494693 758 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC092045.1-201ENST00000495716 1231 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 SAP18P1-201ENST00000512058 390 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 RNA5SP519-201ENST00000516480 119 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 IGLV3-26-201ENST00000520756 302 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC006130.2-201ENST00000586202 326 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 VN1R79P-201ENST00000593540 513 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC005255.1-201ENST00000593748 216 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AL354984.3-201ENST00000604803 325 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 MIR92B-201ENST00000607575 96 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AL645927.2-201ENST00000618350 349 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AL713922.2-201ENST00000619384 716 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC091905.2-201ENST00000623143 306 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 AC095050.2-201ENST00000510748 1458 ntBASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF3Q9HD45 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 RNU1-14P-201ENST00000362759 152 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 RNA5SP175-201ENST00000364275 119 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 RNU1-63P-201ENST00000383902 164 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 RNU1-44P-201ENST00000384453 163 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AC097374.1-203ENST00000400783 485 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 UBTFL3-201ENST00000418934 1024 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AL157831.1-201ENST00000426134 473 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 COX6B1P7-201ENST00000430845 235 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 BMS1P19-201ENST00000433925 393 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 Z95327.1-201ENST00000446082 482 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 UBTFL6-201ENST00000477929 1024 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AC111193.1-201ENST00000504097 155 ntBASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.28□□□□□ -1.72
TM9SF3Q9HD45 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms