Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC016550.1-201ENST00000505348 785 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 RNA5SP73-201ENST00000516744 108 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC090819.1-201ENST00000523800 1111 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AP000916.1-201ENST00000533869 835 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 POLR2KP1-201ENST00000553226 168 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC090515.3-201ENST00000560431 315 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC022968.1-201ENST00000567372 442 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC106734.1-201ENST00000568646 663 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 MIR4330-201ENST00000579077 105 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 MTATP6P2-201ENST00000603319 678 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 MIR6826-201ENST00000617808 98 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC116563.2-201ENST00000624751 535 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 AC092079.1-201ENST00000558620 1985 ntBASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VIPAS39Q9H9C1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 RPL23P2-201ENST00000320371 421 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 RNU1-130P-201ENST00000363930 160 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 RNU1-106P-201ENST00000384382 164 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 MIR1183-201ENST00000408856 89 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 GTF3AP1-201ENST00000416942 1004 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 RPS29P19-201ENST00000479709 171 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 IGKV1-32-201ENST00000519290 311 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC018552.3-201ENST00000567416 561 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 MIR1269B-201ENST00000580405 75 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AP005229.2-201ENST00000609980 697 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 MIR7973-1-201ENST00000614683 76 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 MIR6729-201ENST00000618194 65 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 U6.48-201ENST00000618523 106 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC106858.1-201ENST00000637497 429 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 PRO1804-201ENST00000623780 2050 ntBASIC4.22□□□□□ -1.73
VIPAS39Q9H9C1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
VIPAS39Q9H9C1 OR11H5P-202ENST00000641612 1325 ntBASIC4.21□□□□□ -1.73
VIPAS39Q9H9C1 MTCO1P11-201ENST00000429111 1528 ntBASIC4.21□□□□□ -1.73
VIPAS39Q9H9C1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
VIPAS39Q9H9C1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VIPAS39Q9H9C1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AC103591.2-201ENST00000265259 766 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AL590240.1-201ENST00000334118 313 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 RNA5SP397-201ENST00000391323 118 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 UBE2V1P11-201ENST00000411559 285 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AC069282.1-201ENST00000411911 526 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AL355433.1-201ENST00000422804 300 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AC012497.1-201ENST00000429392 575 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AC006994.1-201ENST00000438212 839 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AC092685.1-201ENST00000447960 1243 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AC092324.1-201ENST00000468671 324 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 SETP6-201ENST00000479329 568 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 RNU7-143P-201ENST00000516781 65 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 IGKV2D-23-201ENST00000518179 286 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 IGLV2-28-201ENST00000520681 304 ntBASIC4.21□□□□□ -1.74
VIPAS39Q9H9C1 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms