Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 SFR1P1-201ENST00000403720 688 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 RN7SKP267-201ENST00000410381 285 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 XKRYP4-201ENST00000414395 483 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 MTCO1P21-201ENST00000416634 589 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 TMBIM7P-201ENST00000418074 855 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 UQCRBP1-201ENST00000421129 336 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AL592293.2-201ENST00000422292 996 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 PNRC2P1-201ENST00000423940 420 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AL451139.1-201ENST00000434718 346 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 UBE2D3P1-201ENST00000436669 444 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 MTCYBP39-201ENST00000437562 491 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 ARL4AP3-201ENST00000441452 574 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AL353898.1-201ENST00000444055 238 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 XKRYP5-201ENST00000449659 483 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 ATG12P2-201ENST00000456830 416 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AC093755.1-201ENST00000512950 1023 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 MRPS33P3-201ENST00000513456 322 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 TCP11X3P-202ENST00000514289 1254 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 NRON-201ENST00000517270 370 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AP003461.1-201ENST00000528866 78 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AP001781.1-201ENST00000530977 207 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 MTCO2P15-201ENST00000532655 656 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AC069061.3-201ENST00000582254 823 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 MRPS35P3-201ENST00000603189 709 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AL590392.1-201ENST00000604960 446 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 MLECP1-201ENST00000615893 709 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 AC098679.5-201ENST00000624394 571 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 OR52H1-202ENST00000641796 1061 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 ZNF876P-202ENST00000398732 1485 ntBASIC4.87□□□□□ -1.63
EBF3Q9H4W6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.87□□□□□ -1.63
EBF3Q9H4W6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 OR13C3-201ENST00000374781 1108 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 MFSD13B-201ENST00000420133 1290 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 PTP4A1P1-201ENST00000420539 515 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 RSL24D1P6-201ENST00000426934 401 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC093422.3-201ENST00000428506 305 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AL445567.1-201ENST00000439121 144 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 Z95152.1-201ENST00000453556 656 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC020890.1-201ENST00000491837 504 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 DEFB109F-201ENST00000491870 277 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC083829.1-201ENST00000503756 657 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC021146.3-201ENST00000511911 260 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 MTCYBP20-201ENST00000524239 1129 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 CYB5AP5-201ENST00000549779 389 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC136624.4-201ENST00000573044 370 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 CYCSP40-201ENST00000575927 294 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC012213.3-201ENST00000577199 777 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 RN7SL176P-201ENST00000580352 264 ntBASIC4.86□□□□□ -1.63
EBF3Q9H4W6 AC079610.2-201ENST00000604818 690 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms