Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 OR56B2P-201ENST00000317102 954 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 HMGN2P21-201ENST00000447764 270 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AL034418.1-201ENST00000448675 860 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 ISCUP1-201ENST00000454451 448 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 NDUFA12P1-201ENST00000455914 406 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 TCP11X3P-202ENST00000514289 1254 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AC105129.1-201ENST00000560250 297 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AL121890.3-201ENST00000618494 516 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AL669942.2-201ENST00000620352 697 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AC073592.7-201ENST00000623659 507 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 LINC01808-202ENST00000641680 1116 ntBASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4AQ9BY43 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 ZNF849P-201ENST00000594711 1566 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 MIR129-1-201ENST00000384972 72 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 SSXP10-201ENST00000402595 565 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 RPL26P29-201ENST00000415623 438 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 UQCRBP1-201ENST00000421129 336 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AC068287.1-201ENST00000430283 295 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AL512661.1-201ENST00000434586 1253 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 RPS26P2-201ENST00000440331 348 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AL031584.1-201ENST00000447169 754 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 RPL5P32-201ENST00000454085 879 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 RPS29P33-201ENST00000456717 146 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 IGLV2-34-201ENST00000490007 283 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AC092045.1-201ENST00000495716 1231 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 MTCO2P9-201ENST00000503214 694 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AC015795.1-201ENST00000513669 327 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 PRELID3BP4-201ENST00000515476 571 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 IGJP1-201ENST00000522682 475 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AC006270.2-201ENST00000578523 652 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AC008687.2-201ENST00000597865 520 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AL009028.1-201ENST00000604895 802 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AC021851.1-201ENST00000608537 1082 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AL133243.1-201ENST00000614487 366 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AP000346.3-201ENST00000622821 210 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 MIR7641-1-201ENST00000627518 61 ntBASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4AQ9BY43 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 RNU2-72P-201ENST00000411175 163 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 RPS27AP7-201ENST00000422792 455 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 DNAJC19P7-201ENST00000428811 344 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC073587.1-201ENST00000447093 876 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AL096803.2-201ENST00000450032 677 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 EIF2S2P5-201ENST00000457635 968 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 snoU13.1-201ENST00000459157 104 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC006463.2-201ENST00000473326 348 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC007688.1-201ENST00000475592 759 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 RPS4XP6-201ENST00000477670 797 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 TMED11P-201ENST00000479478 690 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 IGHV3-32-201ENST00000519182 355 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 BPTFP1-201ENST00000579209 492 ntBASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4AQ9BY43 AC005520.3-201ENST00000602874 370 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms