Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RNU6-1263P-201ENST00000384601 106 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 MIR1251-201ENST00000408552 70 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AL355994.1-201ENST00000424379 260 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 YME1L1P1-201ENST00000429435 297 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 OR7L1P-201ENST00000456181 380 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RN7SKP141-201ENST00000516167 338 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RNU6-352P-201ENST00000516908 107 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 NDUFA5P2-201ENST00000519723 344 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 SNX6P1-201ENST00000601728 1224 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC069200.1-201ENST00000609511 323 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 BMS1P21-201ENST00000634565 365 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 BDP1P-201ENST00000582658 1990 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RNU6-525P-201ENST00000363685 104 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RNU6-1320P-201ENST00000390838 107 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RNU6-1269P-201ENST00000391139 107 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RN7SKP156-201ENST00000410308 342 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 SNORA57.3-201ENST00000411095 141 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RPS3AP25-201ENST00000411660 793 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 GOT2P5-201ENST00000433995 546 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 YWHAQP9-201ENST00000445891 512 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RNU6-599P-201ENST00000459383 107 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RNU6-1193P-201ENST00000459461 107 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RPS27AP18-201ENST00000515536 459 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC084033.1-201ENST00000550830 633 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AL161756.2-201ENST00000604597 246 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC096553.1-201ENST00000605169 829 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AC128687.2-201ENST00000609657 566 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RNU6-368P-201ENST00000620928 107 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 RNU6-538P-201ENST00000622329 107 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 FP236240.3-201ENST00000623061 327 ntBASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.78□□□□□ -1.64
RPAP1Q9BWH6 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 RNA5SP119-201ENST00000362715 117 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 RNA5SP322-201ENST00000363617 119 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 RNA5SP399-201ENST00000364003 117 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 AC019155.1-201ENST00000382242 574 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 U8.11-201ENST00000384699 133 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 U8.12-201ENST00000384701 133 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 ZNF603P-201ENST00000405613 487 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 NPM1P34-201ENST00000428821 893 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 U8.18-201ENST00000459285 133 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 AC022336.1-201ENST00000475510 337 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 RN7SKP157-201ENST00000516174 282 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 OR4A2P-201ENST00000527276 913 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 GNRHR2P1-201ENST00000555315 631 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 AC138473.1-201ENST00000605717 526 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 HMGB1P50-201ENST00000605814 607 ntBASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
RPAP1Q9BWH6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 SNORA73.2-201ENST00000364946 201 ntBASIC4.76□□□□□ -1.65
RPAP1Q9BWH6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms