Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AL049779.3-201ENST00000557141 606 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 RN7SL14P-201ENST00000579715 298 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC016629.2-201ENST00000597341 199 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AL713866.2-201ENST00000603579 219 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC145423.1-201ENST00000605712 336 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC023813.4-201ENST00000607580 580 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC009779.8-202ENST00000607990 932 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC243654.2-201ENST00000612843 443 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC006335.3-201ENST00000613408 292 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 pRNA.9-201ENST00000618609 89 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 ZNF33CP-201ENST00000432492 2030 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 AC074029.4-201ENST00000624796 1859 ntBASIC6.62□□□□□ -1.35
USB1Q9BQ65 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
USB1Q9BQ65 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.62□□□□□ -1.35
USB1Q9BQ65 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC020904.2-202ENST00000614660 1401 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 SNORD62.1-201ENST00000362541 86 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 Y_RNA.276-201ENST00000364732 109 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 RNU6-306P-201ENST00000384617 107 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 SNORA41-201ENST00000384675 132 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 MTCO3P19-201ENST00000415864 321 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 MRPS18BP2-201ENST00000434310 759 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 AL022324.2-201ENST00000434827 780 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC104332.1-201ENST00000440471 797 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC011816.1-201ENST00000441346 546 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 SS18L2P1-201ENST00000445923 213 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC099340.1-201ENST00000475247 599 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 SNX18P27-201ENST00000523611 779 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC008385.1-201ENST00000604421 355 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 MIR7162-201ENST00000611134 69 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 MIR6731-201ENST00000614863 72 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 RN7SL680P-201ENST00000620379 299 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 SALL1P1-201ENST00000438101 3837 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USB1Q9BQ65 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 FOLH1B-202ENST00000529567 2145 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 AL022163.1-201ENST00000430261 1569 ntBASIC6.61□□□□□ -1.35
USB1Q9BQ65 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.61□□□□□ -1.35
USB1Q9BQ65 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 DDX50P1-201ENST00000438163 2400 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC103710.2-202ENST00000641454 2853 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 KYNUP1-201ENST00000466683 1406 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 AC093775.1-201ENST00000624154 1868 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 MTND5P6-201ENST00000422338 1798 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.6□□□□□ -1.35
USB1Q9BQ65 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USB1Q9BQ65 RNU6-746P-201ENST00000384112 109 ntBASIC6.6□□□□□ -1.35
USB1Q9BQ65 RNU6-95P-201ENST00000384697 107 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms