Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL121878.1-201ENST00000418638 859 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC073143.1-201ENST00000436316 395 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 AL008629.1-201ENST00000438615 184 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 ACTR3P2-201ENST00000439585 1257 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC093155.1-201ENST00000440164 826 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP88Q99567 SETD6P1-201ENST00000444575 317 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC104978.1-201ENST00000449387 391 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP88Q99567 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 AP000563.1-201ENST00000490865 758 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 RN7SL346P-201ENST00000491561 294 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC091868.1-201ENST00000508746 304 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 RAB9BP1-201ENST00000519581 626 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 AP000926.4-201ENST00000527351 454 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 NBEAP1-201ENST00000554452 979 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC116553.2-201ENST00000564203 463 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC121761.2-201ENST00000617300 689 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NUP88Q99567 CR381572.2-201ENST00000624852 397 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 MIR7641-1-201ENST00000627518 61 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 MIR1322-201ENST00000638013 71 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP88Q99567 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP88Q99567 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP88Q99567 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP88Q99567 AL022393.1-201ENST00000625142 1677 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP88Q99567 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NUP88Q99567 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP88Q99567 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
NUP88Q99567 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP88Q99567 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP88Q99567 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NUP88Q99567 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP88Q99567 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NUP88Q99567 SNORD65.1-201ENST00000390889 71 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 MIR298-201ENST00000401212 88 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP88Q99567 NCSTNP1-201ENST00000406229 144 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP88Q99567 NRBF2P2-201ENST00000413087 861 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 USP9YP31-201ENST00000431405 881 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC006484.1-201ENST00000435086 1884 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP88Q99567 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP88Q99567 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP88Q99567 RPL7P59-201ENST00000447700 943 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP88Q99567 ATG12P2-201ENST00000456830 416 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP88Q99567 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP88Q99567 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.61□□□□□ -1.51
NUP88Q99567 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP88Q99567 AC011352.3-201ENST00000505162 593 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC073358.1-201ENST00000505671 684 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC111000.3-201ENST00000508057 576 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP88Q99567 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP88Q99567 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP88Q99567 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP88Q99567 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP88Q99567 OSBPL9P5-201ENST00000542581 171 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC093249.4-201ENST00000564755 259 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.61□□□□□ -1.51
NUP88Q99567 BNIP3P24-201ENST00000593398 557 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AL133507.1-201ENST00000605269 557 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC080013.3-201ENST00000606839 578 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC090246.1-201ENST00000616499 426 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AL121890.2-201ENST00000617644 465 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC234782.5-201ENST00000617723 324 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 AC007490.1-201ENST00000624321 703 ntBASIC5.61□□□□□ -1.51
NUP88Q99567 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NUP88Q99567 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP88Q99567 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP88Q99567 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP88Q99567 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP88Q99567 AC027228.2-201ENST00000567141 2154 ntBASIC5.6□□□□□ -1.51
NUP88Q99567 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms