Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RPS26P8-201ENST00000393490 348 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.4□□□□□ -1.87
AP3S1Q92572 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
AP3S1Q92572 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP3S1Q92572 HSPE1P26-201ENST00000405341 275 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 MTHFD2P2-201ENST00000407725 247 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 AL035696.2-201ENST00000407941 709 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 HIGD1AP12-201ENST00000427832 281 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 CYCSP43-201ENST00000438233 310 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 ACTR3P2-201ENST00000439585 1257 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 RPS4XP4-201ENST00000443195 763 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 HMGN2P21-201ENST00000447764 270 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 FCF1P7-201ENST00000451185 558 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 SETP20-201ENST00000457046 852 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.4□□□□□ -1.87
AP3S1Q92572 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC3.4□□□□□ -1.87
AP3S1Q92572 AC010326.1-201ENST00000462726 602 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.4□□□□□ -1.87
AP3S1Q92572 CYCSP20-201ENST00000473154 315 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 RPL21P103-201ENST00000479921 488 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.4□□□□□ -1.87
AP3S1Q92572 PCBP2P3-201ENST00000509726 843 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP3S1Q92572 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.4□□□□□ -1.87
AP3S1Q92572 PCNPP1-201ENST00000552501 511 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.4□□□□□ -1.87
AP3S1Q92572 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.4□□□□□ -1.87
AP3S1Q92572 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.4□□□□□ -1.87
AP3S1Q92572 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.4□□□□□ -1.87
AP3S1Q92572 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.4□□□□□ -1.87
AP3S1Q92572 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.4□□□□□ -1.87
AP3S1Q92572 KLKP1-201ENST00000595979 403 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 LLPHP1-201ENST00000603571 367 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 AC015982.1-201ENST00000608113 465 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 AL592148.3-201ENST00000608771 2646 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.4□□□□□ -1.87
AP3S1Q92572 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
AP3S1Q92572 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.4□□□□□ -1.87
AP3S1Q92572 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.87
AP3S1Q92572 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.39□□□□□ -1.87
AP3S1Q92572 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
AP3S1Q92572 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
AP3S1Q92572 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.39□□□□□ -1.87
AP3S1Q92572 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP3S1Q92572 AC107977.1-201ENST00000355745 939 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 RNA5SP507-201ENST00000363603 121 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 RNU6-283P-201ENST00000364788 107 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.39□□□□□ -1.87
AP3S1Q92572 MIR320B1-201ENST00000390209 79 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AL645927.1-201ENST00000396783 406 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AL590704.1-201ENST00000402856 794 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AC013404.1-201ENST00000413068 249 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
AP3S1Q92572 AL049610.1-201ENST00000423374 372 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AC104837.2-201ENST00000427236 424 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.39□□□□□ -1.87
AP3S1Q92572 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.39□□□□□ -1.87
AP3S1Q92572 RPS7P5-201ENST00000441482 581 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.39□□□□□ -1.87
AP3S1Q92572 RANP8-201ENST00000444720 713 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 RPL31P44-201ENST00000447680 377 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.39□□□□□ -1.87
AP3S1Q92572 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.39□□□□□ -1.87
AP3S1Q92572 NPM1P17-201ENST00000479221 602 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 RPL23AP73-201ENST00000492507 471 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 RN7SL691P-201ENST00000494487 301 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.39□□□□□ -1.87
AP3S1Q92572 AC106806.2-201ENST00000509365 500 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 IGLVIV-64-201ENST00000518581 301 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 HMGN2P6-201ENST00000551091 273 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 NPM1P47-201ENST00000560843 856 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.39□□□□□ -1.87
AP3S1Q92572 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.39□□□□□ -1.87
AP3S1Q92572 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.39□□□□□ -1.87
AP3S1Q92572 AC006254.3-201ENST00000603353 884 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.39□□□□□ -1.87
AP3S1Q92572 AC105429.2-201ENST00000610567 517 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AL512624.1-201ENST00000613638 469 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 AC116563.2-201ENST00000624751 535 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.39□□□□□ -1.87
AP3S1Q92572 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP3S1Q92572 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.39□□□□□ -1.87
AP3S1Q92572 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP3S1Q92572 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
AP3S1Q92572 AC091152.2-201ENST00000591628 2569 ntBASIC3.39□□□□□ -1.87
AP3S1Q92572 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP3S1Q92572 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP3S1Q92572 AC138915.3-201ENST00000562908 1389 ntBASIC3.38□□□□□ -1.87
AP3S1Q92572 RNF6P1-201ENST00000444889 1784 ntBASIC3.38□□□□□ -1.87
AP3S1Q92572 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
AP3S1Q92572 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
AP3S1Q92572 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.38□□□□□ -1.87
AP3S1Q92572 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
AP3S1Q92572 CCNB2P1-201ENST00000399411 1150 ntBASIC3.38□□□□□ -1.87
AP3S1Q92572 MTCO3P31-201ENST00000405526 789 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms