Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 OR51A3P-201ENST00000413596 924 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC019050.1-201ENST00000418508 492 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 SEPT7P5-201ENST00000434048 306 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 NMNAT1P2-201ENST00000435192 860 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AL360221.1-201ENST00000445989 335 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AL161722.1-201ENST00000446972 1032 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 CYCSP34-201ENST00000458172 304 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC079841.1-201ENST00000481228 950 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 RN7SL97P-201ENST00000486780 299 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 RN7SL244P-201ENST00000493405 297 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC092045.1-201ENST00000495716 1231 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 RN7SL558P-201ENST00000497468 299 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 SNRPCP2-201ENST00000504370 475 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 HIGD1AP14-201ENST00000507617 282 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC005178.1-201ENST00000508392 440 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 MTCO3P7-201ENST00000510008 774 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 TVP23CP2-201ENST00000571473 623 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 OR4K7P-201ENST00000580232 945 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 SNORA74C-1-201ENST00000580726 201 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AP001981.2-201ENST00000603241 418 ntBASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ATG4AQ8WYN0 Z99496.1-201ENST00000469424 1477 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 SLC10A5P1-201ENST00000379063 1306 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 SOCS5P3-201ENST00000425115 1576 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 ARL4AP5-201ENST00000404372 599 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AL022400.1-201ENST00000423946 935 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 UBE2V1P5-201ENST00000440070 405 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC093155.1-201ENST00000440164 826 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 CNOT7P2-201ENST00000441051 832 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 RPS7P5-201ENST00000441482 581 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 TPMTP4-201ENST00000450749 678 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AL445433.1-201ENST00000457507 257 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 CCDC75P1-201ENST00000469247 791 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AL161747.1-201ENST00000480068 358 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 RN7SL319P-201ENST00000480656 221 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 IGBP1P5-201ENST00000507524 1000 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC108471.1-201ENST00000513977 287 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 RNU6-1225P-201ENST00000516336 65 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 CA1-215ENST00000522389 551 ntTSL 3 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC011447.4-201ENST00000587562 111 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5□□□□□ -1.61
ATG4AQ8WYN0 RNF138P2-201ENST00000603490 592 ntBASIC5□□□□□ -1.61
ATG4AQ8WYN0 AP003973.1-201ENST00000604639 691 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms