Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC104090.1-201ENST00000506341 1171 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC113430.1-201ENST00000506872 718 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 CBX3P3-201ENST00000508108 532 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 RN7SKP96-201ENST00000516948 297 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AP000873.5-201ENST00000533906 236 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AP004607.2-201ENST00000533949 322 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 UBE2NP1-201ENST00000545592 458 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 HIGD1AP17-201ENST00000554576 276 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 SERPINE4P-201ENST00000554978 281 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC006539.2-201ENST00000601729 572 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC091488.1-201ENST00000604239 660 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC000068.2-201ENST00000608816 460 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC138749.5-201ENST00000611461 208 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AL592148.2-201ENST00000612210 372 ntBASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SIMC1Q8NDZ2 AC104623.2-202ENST00000623477 4002 ntBASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 AC138393.1-206ENST00000540997 1886 ntBASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 AC000374.1-201ENST00000434698 1745 ntBASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
SIMC1Q8NDZ2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 Y_RNA.41-201ENST00000362646 102 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 RNU6-694P-201ENST00000364071 147 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 RNY3P14-201ENST00000384309 102 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 MIR16-1-201ENST00000385271 89 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 DEFB108C-201ENST00000400154 252 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 RNU6-920P-201ENST00000410926 92 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 RNU6-272P-201ENST00000411028 104 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 PGBD4P8-201ENST00000412993 562 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 FAM96AP1-201ENST00000430879 482 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 CDC27P1-201ENST00000445384 715 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 RNU6-956P-201ENST00000458868 103 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AP000942.1-201ENST00000463969 747 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC011979.1-201ENST00000472300 483 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 SETP11-201ENST00000473027 690 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 RPL9P33-201ENST00000484311 566 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AL049874.2-201ENST00000492636 288 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC090638.1-201ENST00000498296 909 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 CDC42P4-201ENST00000510507 563 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 TCP11X3P-202ENST00000514289 1254 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 snoZ278.1-201ENST00000517059 112 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC107918.3-201ENST00000533272 382 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 NIFKP8-201ENST00000560500 874 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC116553.2-201ENST00000564203 463 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 MIR4512-201ENST00000583257 77 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 MIR7853-201ENST00000584820 132 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC091135.1-201ENST00000585943 307 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 WISP1-OT1-201ENST00000602893 642 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC108738.1-201ENST00000603703 237 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC006270.3-201ENST00000605967 1036 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AL139124.1-201ENST00000609123 421 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC116651.1-201ENST00000609724 556 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC010632.3-201ENST00000611377 369 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC100793.4-201ENST00000613683 429 ntBASIC5.08□□□□□ -1.6
SIMC1Q8NDZ2 AC243756.2-201ENST00000618406 463 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms