Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ELL2P3-201ENST00000457883 1602 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 AC021755.1-201ENST00000559747 1447 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 RNF6P1-201ENST00000444889 1784 ntBASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMC1BQ8NDV3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC083843.2-201ENST00000568248 6253 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 RN7SKP280-201ENST00000364196 304 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 Y_RNA.318-201ENST00000365131 97 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 RSL24D1P4-201ENST00000400938 484 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 TMSB4XP8-201ENST00000402089 135 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 TMSB4XP6-201ENST00000415187 135 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AL121878.1-201ENST00000418638 859 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 RAD23BP1-201ENST00000421404 1227 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 TMSB4XP1-201ENST00000424567 135 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 MTCO1P54-201ENST00000430139 712 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC099670.2-201ENST00000435130 321 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AL445567.1-201ENST00000439121 144 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 MTCO2P25-201ENST00000447065 681 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC114755.5-201ENST00000447760 831 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC010733.1-201ENST00000451515 401 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 VPS26AP1-201ENST00000483197 979 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AL035404.1-201ENST00000497982 568 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC073358.1-201ENST00000505671 684 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC007016.1-201ENST00000512110 244 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC008837.2-201ENST00000513076 418 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC108471.1-201ENST00000513977 287 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 RNU6-232P-201ENST00000517144 64 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 FTH1P11-201ENST00000517577 551 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC009220.3-201ENST00000604318 586 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 MIR6075-201ENST00000620782 95 ntBASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMC1BQ8NDV3 AC005539.1-201ENST00000443768 1479 ntBASIC5.96□□□□□ -1.45
SMC1BQ8NDV3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.96□□□□□ -1.45
SMC1BQ8NDV3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SMC1BQ8NDV3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SMC1BQ8NDV3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AP000776.1-201ENST00000530032 1663 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 SNORA62.3-201ENST00000365110 153 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 RNU6-757P-201ENST00000410334 100 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AC008280.1-201ENST00000418851 412 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 GNG5P5-201ENST00000420444 220 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 MRPS36P1-201ENST00000421291 307 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AL593851.1-201ENST00000426171 157 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 HMGN2P27-201ENST00000427352 270 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 RPL34P6-201ENST00000432390 345 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 ATP5F1P1-201ENST00000433775 569 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 RPS7P5-201ENST00000441482 581 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 GAPDHP14-201ENST00000450472 937 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 BZW1P2-201ENST00000473537 826 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 DYNLL1P6-201ENST00000503440 264 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 WBP1LP4-201ENST00000505043 344 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AC111000.2-201ENST00000507775 550 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AC109445.1-201ENST00000512356 383 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AP001781.1-201ENST00000530977 207 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AC068831.4-201ENST00000556118 109 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 MIR3138-201ENST00000585238 82 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AL451074.6-201ENST00000608512 729 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 uc_338.9-201ENST00000617424 182 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 AF001550.2-201ENST00000636643 217 ntBASIC5.96□□□□□ -1.46
SMC1BQ8NDV3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms