Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 RNU6-7-201ENST00000364784 107 ntBASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 RNU6-8-201ENST00000365467 107 ntBASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 BMS1P3-201ENST00000372011 932 ntBASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 AC011825.1-201ENST00000484967 388 ntBASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 HMGB3P16-201ENST00000508037 287 ntBASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 AC139713.2-215ENST00000641428 5037 ntBASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC168Q8NDH2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC073335.1-201ENST00000427776 363 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 RAB28P3-201ENST00000448325 597 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 RN7SKP31-201ENST00000516354 278 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC007066.2-202ENST00000566531 914 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC079171.1-201ENST00000568788 914 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 MIR432-201ENST00000606207 94 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 ZNF962P-201ENST00000443465 3140 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC005831.1-201ENST00000624384 1697 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 RPL7P60-201ENST00000397636 735 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC009506.2-201ENST00000420635 840 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 MAPK10-349ENST00000641767 3661 ntBASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC168Q8NDH2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 AC007823.1-201ENST00000569932 1566 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 FTLP6-201ENST00000355274 422 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 HSPE1P27-201ENST00000430808 296 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 BTF3P5-201ENST00000457252 467 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 RPL23AP65-201ENST00000475608 468 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 RPL5P12-201ENST00000477071 851 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 STMN1P2-201ENST00000508435 439 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 AP000542.2-201ENST00000623199 6179 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 RNA5SP50-201ENST00000363731 107 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 U3.19-201ENST00000390893 196 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 KC877373.1-201ENST00000479066 408 ntBASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC168Q8NDH2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms