Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC083899.2-201ENST00000423285 1376 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AL138878.1-201ENST00000405131 347 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 ZNF603P-201ENST00000405613 487 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 OR8G2P-201ENST00000412796 908 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 RPL7AP73-201ENST00000413490 353 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AL691447.1-201ENST00000419456 387 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AC092647.1-201ENST00000420654 287 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AJ239321.1-201ENST00000424255 564 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 C4BPAP2-201ENST00000428434 478 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AC011742.1-201ENST00000431448 434 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AC096638.2-201ENST00000434965 711 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 RPL31P20-201ENST00000449593 360 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 RPS11P1-201ENST00000451072 473 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 CEACAMP10-202ENST00000495431 496 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 ATG10-AS1-201ENST00000504846 648 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AC139783.2-201ENST00000504847 1145 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 RNU6-551P-201ENST00000516661 103 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 SMARCE1P4-201ENST00000523647 241 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 OR8X1P-201ENST00000534542 869 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 MIR378J-201ENST00000611988 109 ntBASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC65Q8IXS2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC017007.4-201ENST00000503353 1352 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AL121657.1-201ENST00000327215 531 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 RNU6-618P-201ENST00000363518 112 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AL356095.1-201ENST00000417217 199 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC244453.4-201ENST00000419150 388 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 HMGB1P37-201ENST00000439613 609 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 RPS7P7-201ENST00000463499 571 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC087385.1-201ENST00000475062 312 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 MTND6P6-201ENST00000478031 263 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AL132838.2-201ENST00000492041 314 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 RNA5SP309-201ENST00000516670 106 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC109635.6-201ENST00000525487 1113 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC091515.1-201ENST00000548110 679 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 VN1R84P-201ENST00000593697 235 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AL139089.1-201ENST00000620372 975 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC112484.5-201ENST00000624189 228 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC090229.1-201ENST00000590983 1609 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 AC027287.1-201ENST00000553115 1453 ntBASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC65Q8IXS2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 RNA5SP399-201ENST00000364003 117 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 RNU6-1251P-201ENST00000364502 107 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AL034403.1-201ENST00000399414 885 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AL049693.1-201ENST00000402760 611 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 MTCYBP7-201ENST00000419540 1134 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 RFESDP1-201ENST00000422350 461 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC087650.1-201ENST00000431445 468 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 KCTD9P3-201ENST00000434597 1169 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 RAD1P2-201ENST00000446414 663 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AL157884.3-201ENST00000448273 1184 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 CALM1P2-201ENST00000452941 448 ntBASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC65Q8IXS2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms