Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AP000843.1-201ENST00000624880 701 ntBASIC4.07□□□□□ -1.76
CCDC71Q8IV32 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC71Q8IV32 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC71Q8IV32 CPHL1P-201ENST00000461341 3407 ntBASIC4.07□□□□□ -1.76
CCDC71Q8IV32 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC71Q8IV32 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC71Q8IV32 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC71Q8IV32 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC71Q8IV32 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AL136520.1-201ENST00000600311 1322 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 RNU6-796P-201ENST00000391086 107 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 PNRC2P1-201ENST00000423940 420 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 RPS29P17-201ENST00000430795 166 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AL158053.1-201ENST00000441503 453 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 NUTF2P3-201ENST00000448540 384 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 ABCF2P2-201ENST00000450549 296 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 RPL32P14-201ENST00000463196 378 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 RPS27AP16-201ENST00000492222 470 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC010476.1-201ENST00000519111 851 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 OR8G5-201ENST00000524943 1041 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC007224.1-201ENST00000564410 144 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 MIR3160-1-201ENST00000577972 85 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 MIR432-201ENST00000606207 94 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC020634.1-201ENST00000608701 549 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC023043.4-201ENST00000612081 449 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 USP9YP4-201ENST00000424401 1745 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 Z73965.1-201ENST00000623412 2297 ntBASIC4.06□□□□□ -1.76
CCDC71Q8IV32 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC71Q8IV32 AC093311.1-201ENST00000506586 2021 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 ZNF962P-201ENST00000443465 3140 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 OR4K17-201ENST00000315543 1032 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 RNU6-1279P-201ENST00000383917 103 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 RNU6-452P-201ENST00000384406 107 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AL035405.1-201ENST00000400795 710 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 HMGB1P13-201ENST00000406019 642 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC011933.1-201ENST00000413334 321 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 MTCO3P4-201ENST00000419236 787 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 RWDD4P2-201ENST00000426392 563 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 FO393419.3-201ENST00000428741 282 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 NANOGP6-201ENST00000429190 847 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 RPS27AP12-201ENST00000429552 465 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC011998.1-201ENST00000433403 117 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 ELOCP18-201ENST00000434209 337 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 RPL7P55-201ENST00000450522 746 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 RPL7P32-201ENST00000457119 744 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 RNU7-27P-201ENST00000459281 62 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC116533.1-201ENST00000459748 321 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 RPL7P48-201ENST00000461513 746 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 CYCSP20-201ENST00000473154 315 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC139783.2-201ENST00000504847 1145 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC112518.2-201ENST00000508565 425 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC108471.1-201ENST00000513977 287 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 snoU109.6-201ENST00000516831 118 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 CYCSP29-201ENST00000533731 318 ntBASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC71Q8IV32 AC084824.1-201ENST00000550917 1005 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms