Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC010376.1-201ENST00000522101 334 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 OR8L1P-201ENST00000534005 955 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC139103.1-201ENST00000534696 1030 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC087477.6-201ENST00000559595 843 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 RN7SL652P-201ENST00000577769 300 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 MIR4270-201ENST00000581799 70 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 VN1R87P-201ENST00000596706 487 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 BNIP3P32-201ENST00000600015 554 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC105148.1-201ENST00000604961 409 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC018754.1-201ENST00000607486 925 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC116651.1-201ENST00000609724 556 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 MIR6853-201ENST00000619642 74 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC006065.5-201ENST00000623427 349 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC099654.8-201ENST00000637757 681 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 AC104446.1-201ENST00000613728 1321 ntBASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP54Q7Z3B4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC103591.2-201ENST00000265259 766 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AL590762.2-201ENST00000395798 571 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 MIR921-201ENST00000401133 56 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 ATG4AP1-201ENST00000416893 538 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC246680.2-201ENST00000422106 389 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 PSMA2P3-201ENST00000429685 675 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 RPL7P4-203ENST00000430239 730 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC002542.1-201ENST00000440683 193 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 HMGB3P30-201ENST00000457863 606 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC025164.1-201ENST00000496249 478 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 SUMO2P5-201ENST00000506790 245 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC008885.2-201ENST00000509506 930 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 PRELID3BP4-201ENST00000515476 571 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC023762.1-201ENST00000603280 584 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC098935.2-201ENST00000604222 466 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC092608.3-201ENST00000625017 386 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 MTCO1P6-201ENST00000481192 1384 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 AC026951.1-201ENST00000559530 2459 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 MTND5P3-201ENST00000438536 1800 ntBASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP54Q7Z3B4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 RNU1-83P-201ENST00000363426 164 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 RNU6-1293P-201ENST00000384077 107 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AL732292.1-201ENST00000426692 226 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 DNAJC19P8-201ENST00000452887 259 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC079168.2-201ENST00000453977 416 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC108751.2-201ENST00000469993 231 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC022795.1-201ENST00000473808 480 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC104982.1-201ENST00000478775 574 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 RPS23P1-201ENST00000491662 432 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 HPRT1P2-201ENST00000505250 544 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AC118942.1-201ENST00000529674 1035 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 OR6C73P-201ENST00000546432 358 ntBASIC4.34□□□□□ -1.71
NUP54Q7Z3B4 AL110118.1-201ENST00000553543 400 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms