Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPP40P1-201ENST00000426762 456 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC093155.1-201ENST00000440164 826 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 CNOT7P2-201ENST00000441051 832 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AL163193.1-201ENST00000444895 788 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AL354714.3-201ENST00000447284 493 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 FGF7P3-201ENST00000454645 303 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC011979.1-201ENST00000472300 483 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 RPS3AP6-201ENST00000484430 795 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 RN7SL30P-201ENST00000488416 306 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC025674.1-201ENST00000507074 324 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AF186190.1-201ENST00000517470 480 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 NPM1P6-201ENST00000521088 871 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 GSTP1P1-201ENST00000548078 319 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AADACP1-206ENST00000561502 1193 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC093519.1-201ENST00000566109 298 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC113368.1-201ENST00000603736 382 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC211433.2-201ENST00000608433 387 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC009704.2-201ENST00000618739 483 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC068620.4-201ENST00000636730 1182 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC38Q502W7 ERCC6-202ENST00000374127 1782 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC38Q502W7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC38Q502W7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 DHX9P1-201ENST00000436565 3076 ntBASIC5.05□□□□□ -1.6
CCDC38Q502W7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC38Q502W7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC38Q502W7 DDX18P5-201ENST00000534547 1306 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AL592437.2-201ENST00000421655 2434 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC38Q502W7 SNURFL-201ENST00000309296 343 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC008549.2-201ENST00000333482 706 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 SNORA74A-201ENST00000364089 198 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 HMGB1P49-201ENST00000418882 569 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 EIF4HP2-201ENST00000424380 563 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 RPL21P43-201ENST00000425440 472 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC38Q502W7 IFNNP1-201ENST00000429219 553 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC092162.1-201ENST00000432828 434 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 RPS26P56-201ENST00000444468 240 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 PTENP1-201ENST00000447117 1215 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC004022.1-201ENST00000447766 1066 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AL034418.1-201ENST00000448675 860 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 NDUFA5P7-201ENST00000452914 242 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 BX284632.1-201ENST00000478218 541 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 HMGN2P25-201ENST00000486956 268 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC008953.1-201ENST00000497334 318 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 HMGB1P21-201ENST00000502313 581 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC090071.1-201ENST00000507713 644 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 RNA5SP92-201ENST00000516437 110 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 RN7SKP287-201ENST00000516546 266 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 RNA5SP34-201ENST00000516887 130 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC087808.1-201ENST00000520501 361 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC090312.1-201ENST00000580637 348 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC093424.1-201ENST00000604999 338 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC087783.2-201ENST00000605070 562 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC023158.2-201ENST00000614876 543 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms