Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 RNU7-143P-201ENST00000516781 65 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC022790.1-201ENST00000522872 204 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC068831.4-201ENST00000556118 109 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC025627.2-201ENST00000576220 160 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AL161729.3-201ENST00000603533 673 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AL356218.2-201ENST00000605264 187 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 RNVU1-4-201ENST00000612985 164 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC123768.4-201ENST00000616244 701 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 AC138649.5-201ENST00000637456 137 ntBASIC3.06□□□□□ -1.92
HIST1H1AQ02539 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HIST1H1AQ02539 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 RNU6-1331P-201ENST00000363658 106 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 RNU2-37P-201ENST00000410695 177 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC093084.1-201ENST00000424233 687 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 RPS4XP4-201ENST00000443195 763 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 OR52Y1P-201ENST00000452418 828 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 RPL38P1-201ENST00000460914 211 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 HPRT1P2-201ENST00000505250 544 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC093824.1-201ENST00000508796 343 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 KRT19P6-201ENST00000510983 209 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AL133457.1-201ENST00000564251 987 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 ZNF192P1-203ENST00000565888 810 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 MIR4277-201ENST00000578298 84 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC006270.2-201ENST00000578523 652 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 MIR5684-201ENST00000585074 65 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 EIF1P6-201ENST00000600054 334 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 GMCL1P2-201ENST00000605230 823 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC008121.2-201ENST00000614647 523 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AL121890.3-201ENST00000618494 516 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 SAGE2P-201ENST00000420011 2126 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 AC119744.1-201ENST00000454746 1715 ntBASIC3.05□□□□□ -1.92
HIST1H1AQ02539 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HIST1H1AQ02539 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 RIOK3P1-201ENST00000418778 1528 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AF127577.6-201ENST00000623352 2191 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 SPATA2P1-201ENST00000431223 2055 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 GABPAP-201ENST00000419271 1356 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 SNORA60-201ENST00000362396 134 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 RPL37P18-201ENST00000411602 243 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC007390.1-201ENST00000415722 356 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AL590806.1-201ENST00000415818 853 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AIMP1P1-201ENST00000418670 937 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 RPS27AP7-201ENST00000422792 455 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC245028.1-201ENST00000423259 256 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 OR5BE1P-201ENST00000425977 939 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 KCTD9P3-201ENST00000434597 1169 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AL500522.2-201ENST00000448562 343 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 RNA5SP246-201ENST00000458909 119 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 RN7SL604P-201ENST00000492589 296 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms