Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MIR3074-201ENST00000384885 81 ntBASIC3.85□□□□□ -1.79
VSX2P58304 PPIAP31-201ENST00000405422 495 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AL034374.1-201ENST00000406329 351 ntBASIC3.85□□□□□ -1.79
VSX2P58304 RNA5SP306-201ENST00000411087 107 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.85□□□□□ -1.79
VSX2P58304 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.85□□□□□ -1.79
VSX2P58304 JKAMPP1-201ENST00000413804 919 ntBASIC3.85□□□□□ -1.79
VSX2P58304 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.85□□□□□ -1.79
VSX2P58304 AL391219.1-201ENST00000422570 483 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.85□□□□□ -1.79
VSX2P58304 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.85□□□□□ -1.79
VSX2P58304 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.85□□□□□ -1.79
VSX2P58304 TBCAP1-201ENST00000436520 327 ntBASIC3.85□□□□□ -1.79
VSX2P58304 CACYBPP1-201ENST00000438592 684 ntBASIC3.85□□□□□ -1.79
VSX2P58304 ELOCP8-201ENST00000439309 332 ntBASIC3.85□□□□□ -1.79
VSX2P58304 ELOCP15-201ENST00000442090 332 ntBASIC3.85□□□□□ -1.79
VSX2P58304 RAD1P2-201ENST00000446414 663 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC146944.2-203ENST00000502493 354 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC017037.1-201ENST00000508460 471 ntBASIC3.85□□□□□ -1.79
VSX2P58304 FTH1P21-201ENST00000512179 511 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC139495.1-202ENST00000513164 354 ntBASIC3.85□□□□□ -1.79
VSX2P58304 OR5M7P-201ENST00000526140 972 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.85□□□□□ -1.79
VSX2P58304 UBTFL9-201ENST00000534504 1148 ntBASIC3.85□□□□□ -1.79
VSX2P58304 OR8X1P-201ENST00000534542 869 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.85□□□□□ -1.79
VSX2P58304 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.85□□□□□ -1.79
VSX2P58304 AC124068.1-201ENST00000563131 678 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.85□□□□□ -1.79
VSX2P58304 AC018552.3-201ENST00000567416 561 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC120057.2-201ENST00000571520 271 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC093227.2-201ENST00000589357 285 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.85□□□□□ -1.79
VSX2P58304 HMGB1P51-201ENST00000605166 638 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AL109618.2-201ENST00000605527 211 ntBASIC3.85□□□□□ -1.79
VSX2P58304 AC012603.1-201ENST00000606424 528 ntBASIC3.85□□□□□ -1.79
VSX2P58304 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.85□□□□□ -1.79
VSX2P58304 AL031985.3-201ENST00000565390 2449 ntBASIC3.85□□□□□ -1.79
VSX2P58304 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VSX2P58304 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VSX2P58304 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VSX2P58304 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
VSX2P58304 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.84□□□□□ -1.79
VSX2P58304 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
VSX2P58304 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VSX2P58304 RNU1-64P-201ENST00000365443 163 ntBASIC3.84□□□□□ -1.79
VSX2P58304 RNU6-152P-201ENST00000384037 107 ntBASIC3.84□□□□□ -1.79
VSX2P58304 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.84□□□□□ -1.79
VSX2P58304 CYP4F29P-201ENST00000420685 446 ntBASIC3.84□□□□□ -1.79
VSX2P58304 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.84□□□□□ -1.79
VSX2P58304 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.84□□□□□ -1.79
VSX2P58304 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.84□□□□□ -1.79
VSX2P58304 RPS11P1-201ENST00000451072 473 ntBASIC3.84□□□□□ -1.79
VSX2P58304 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.84□□□□□ -1.79
VSX2P58304 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.84□□□□□ -1.79
VSX2P58304 RPL23AP71-201ENST00000470966 469 ntBASIC3.84□□□□□ -1.79
VSX2P58304 AC007537.2-201ENST00000472093 511 ntBASIC3.84□□□□□ -1.79
VSX2P58304 S100A11P1-201ENST00000477525 312 ntBASIC3.84□□□□□ -1.79
VSX2P58304 TPT1P3-201ENST00000492841 512 ntBASIC3.84□□□□□ -1.79
VSX2P58304 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.84□□□□□ -1.79
VSX2P58304 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.84□□□□□ -1.79
VSX2P58304 RNU6-551P-201ENST00000516661 103 ntBASIC3.84□□□□□ -1.79
VSX2P58304 IGHV3-32-201ENST00000519182 355 ntBASIC3.84□□□□□ -1.79
VSX2P58304 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.84□□□□□ -1.79
VSX2P58304 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.84□□□□□ -1.79
VSX2P58304 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.84□□□□□ -1.79
VSX2P58304 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.84□□□□□ -1.79
VSX2P58304 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.84□□□□□ -1.79
VSX2P58304 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.84□□□□□ -1.79
VSX2P58304 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VSX2P58304 MIR4286-201ENST00000580651 93 ntBASIC3.84□□□□□ -1.79
VSX2P58304 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.84□□□□□ -1.79
VSX2P58304 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.84□□□□□ -1.79
VSX2P58304 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.84□□□□□ -1.79
VSX2P58304 AL606490.9-201ENST00000603331 271 ntBASIC3.84□□□□□ -1.79
VSX2P58304 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.84□□□□□ -1.79
VSX2P58304 AC095038.2-201ENST00000621464 1070 ntBASIC3.84□□□□□ -1.79
VSX2P58304 AC103858.2-201ENST00000621471 543 ntBASIC3.84□□□□□ -1.79
VSX2P58304 MIR6500-201ENST00000622700 86 ntBASIC3.84□□□□□ -1.79
VSX2P58304 AC008785.1-201ENST00000624475 456 ntBASIC3.84□□□□□ -1.79
VSX2P58304 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.84□□□□□ -1.79
VSX2P58304 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.84□□□□□ -1.79
VSX2P58304 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VSX2P58304 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VSX2P58304 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VSX2P58304 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 AC022893.2-201ENST00000564832 3296 ntBASIC3.83□□□□□ -1.8
VSX2P58304 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
VSX2P58304 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VSX2P58304 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 FAM91A3P-201ENST00000456826 2544 ntBASIC3.83□□□□□ -1.8
VSX2P58304 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.83□□□□□ -1.8
VSX2P58304 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 SNORD65-201ENST00000391079 73 ntBASIC3.83□□□□□ -1.8
VSX2P58304 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VSX2P58304 RN7SKP27-201ENST00000410684 333 ntBASIC3.83□□□□□ -1.8
VSX2P58304 AL356806.1-201ENST00000422524 916 ntBASIC3.83□□□□□ -1.8
VSX2P58304 OR8F1P-201ENST00000425243 930 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms