Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 RN7SKP99-201ENST00000517028 307 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF144AP50876 AP006587.5-201ENST00000532033 739 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF144AP50876 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.35□□□□□ -1.39
RNF144AP50876 AL135978.1-201ENST00000553618 1266 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF144AP50876 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF144AP50876 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF144AP50876 AC111186.1-201ENST00000604684 130 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 AC020634.1-201ENST00000608701 549 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.35□□□□□ -1.39
RNF144AP50876 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.35□□□□□ -1.39
RNF144AP50876 AC137590.2-201ENST00000619709 240 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 PLCE1P1-201ENST00000622094 305 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RNF144AP50876 NLRP3P1-201ENST00000622303 1785 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 MTND5P28-201ENST00000438005 1594 ntBASIC6.35□□□□□ -1.39
RNF144AP50876 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.35□□□□□ -1.39
RNF144AP50876 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RNF144AP50876 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.35□□□□□ -1.39
RNF144AP50876 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RNF144AP50876 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF144AP50876 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF144AP50876 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RNF144AP50876 AC008957.3-201ENST00000624112 2242 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF144AP50876 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RNF144AP50876 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 AC093278.2-201ENST00000564956 2485 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 AC129502.1-201ENST00000623261 1654 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF144AP50876 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF144AP50876 RNA5SP114-201ENST00000363780 113 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 SNORA75B-201ENST00000384053 137 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 Y_RNA.463-201ENST00000384271 102 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 MIR187-201ENST00000385062 109 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AL360271.1-201ENST00000395679 510 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AL359715.1-201ENST00000404330 555 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 MIR548M-201ENST00000408260 86 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 RN7SKP268-201ENST00000411107 316 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.34□□□□□ -1.39
RNF144AP50876 FDPSP6-201ENST00000425091 512 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.34□□□□□ -1.39
RNF144AP50876 RPL23AP74-201ENST00000437246 471 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AL031663.1-201ENST00000437445 219 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 CBX1P4-201ENST00000439415 457 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 RNU7-180P-201ENST00000459240 63 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 RPL7P43-201ENST00000478876 753 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC092451.1-201ENST00000480211 153 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 RPS10P28-201ENST00000480396 498 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC093267.1-201ENST00000489176 961 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF144AP50876 Y_RNA.654-201ENST00000497848 106 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 AC097473.1-201ENST00000508142 408 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF144AP50876 RNY3P15-201ENST00000516297 97 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 RNU6-256P-201ENST00000516747 97 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.34□□□□□ -1.39
RNF144AP50876 MTND4P7-201ENST00000523876 130 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RNF144AP50876 HNRNPCP8-201ENST00000528764 888 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 AC138761.3-201ENST00000579993 334 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 MIR3672-201ENST00000584290 82 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF144AP50876 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 AC068790.3-201ENST00000602988 553 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 Z82243.1-201ENST00000609432 473 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF144AP50876 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 AC107871.2-201ENST00000612894 502 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 uc_338.34-201ENST00000617467 174 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 AC098657.3-201ENST00000620434 263 ntBASIC6.34□□□□□ -1.39
RNF144AP50876 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF144AP50876 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF144AP50876 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.34□□□□□ -1.4
RNF144AP50876 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
RNF144AP50876 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.4
RNF144AP50876 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.34□□□□□ -1.4
RNF144AP50876 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
RNF144AP50876 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms