Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.1□□□□□ -1.75
FDFT1P37268 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.1□□□□□ -1.75
FDFT1P37268 AC005261.4-201ENST00000600047 1385 ntBASIC4.1□□□□□ -1.75
FDFT1P37268 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.1□□□□□ -1.75
FDFT1P37268 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FDFT1P37268 USP9YP4-201ENST00000424401 1745 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
FDFT1P37268 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
FDFT1P37268 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.09□□□□□ -1.75
FDFT1P37268 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
FDFT1P37268 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FDFT1P37268 OR11H4-201ENST00000315409 1082 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.09□□□□□ -1.75
FDFT1P37268 RNU6-185P-201ENST00000384421 107 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 MIR585-201ENST00000384887 94 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 RN7SKP33-201ENST00000410942 340 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.09□□□□□ -1.75
FDFT1P37268 HSPE1P12-201ENST00000412576 301 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.09□□□□□ -1.75
FDFT1P37268 YWHAQP9-201ENST00000445891 512 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.09□□□□□ -1.75
FDFT1P37268 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.09□□□□□ -1.75
FDFT1P37268 RN7SL459P-201ENST00000481078 302 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 AC105137.1-201ENST00000484355 562 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 AC023050.1-201ENST00000498198 304 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.09□□□□□ -1.75
FDFT1P37268 FABP5P6-201ENST00000510588 409 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.09□□□□□ -1.75
FDFT1P37268 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
FDFT1P37268 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.09□□□□□ -1.75
FDFT1P37268 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.09□□□□□ -1.75
FDFT1P37268 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
FDFT1P37268 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.09□□□□□ -1.75
FDFT1P37268 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.09□□□□□ -1.75
FDFT1P37268 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.09□□□□□ -1.75
FDFT1P37268 AC084036.1-201ENST00000609190 508 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 OR6R2P-201ENST00000609216 300 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 AC055764.2-201ENST00000610089 670 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FDFT1P37268 MIR486-1-201ENST00000612171 68 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
FDFT1P37268 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.09□□□□□ -1.75
FDFT1P37268 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.09□□□□□ -1.75
FDFT1P37268 AC073429.2-201ENST00000569694 1444 ntBASIC4.09□□□□□ -1.75
FDFT1P37268 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.09□□□□□ -1.75
FDFT1P37268 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
FDFT1P37268 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
FDFT1P37268 AC007529.1-201ENST00000418574 2178 ntBASIC4.09□□□□□ -1.76
FDFT1P37268 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
FDFT1P37268 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
FDFT1P37268 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FDFT1P37268 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
FDFT1P37268 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
FDFT1P37268 AL133412.1-201ENST00000380194 2992 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 RNU11-4P-201ENST00000391149 133 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 AMD1P2-201ENST00000412936 992 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 TPT1P2-201ENST00000413105 503 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 RPL7AP73-201ENST00000413490 353 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.08□□□□□ -1.76
FDFT1P37268 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FDFT1P37268 AC016769.2-201ENST00000414815 475 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.08□□□□□ -1.76
FDFT1P37268 OR5BE1P-201ENST00000425977 939 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 COX6CP15-201ENST00000426313 211 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 UBE3AP2-201ENST00000429033 2259 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 HIGD1AP4-201ENST00000430194 280 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.08□□□□□ -1.76
FDFT1P37268 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.08□□□□□ -1.76
FDFT1P37268 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
FDFT1P37268 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.08□□□□□ -1.76
FDFT1P37268 CEACAMP9-201ENST00000442990 513 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.08□□□□□ -1.76
FDFT1P37268 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.08□□□□□ -1.76
FDFT1P37268 RPL7P48-201ENST00000461513 746 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 AC106806.2-201ENST00000509365 500 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.08□□□□□ -1.76
FDFT1P37268 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.08□□□□□ -1.76
FDFT1P37268 CDH12P4-201ENST00000517835 295 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 CDH12P3-201ENST00000517935 295 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 CDH12P1-201ENST00000518435 295 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 AP003730.1-201ENST00000524605 285 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.08□□□□□ -1.76
FDFT1P37268 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.08□□□□□ -1.76
FDFT1P37268 CR383656.6-201ENST00000550518 394 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
FDFT1P37268 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.08□□□□□ -1.76
FDFT1P37268 AL161713.1-201ENST00000555538 145 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.08□□□□□ -1.76
FDFT1P37268 AC090229.1-201ENST00000590983 1609 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 AC008745.1-201ENST00000604064 271 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.08□□□□□ -1.76
FDFT1P37268 OR5BE1P-202ENST00000641168 1176 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 OR5AC4P-202ENST00000642086 985 ntBASIC4.08□□□□□ -1.76
FDFT1P37268 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.08□□□□□ -1.76
FDFT1P37268 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
FDFT1P37268 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
FDFT1P37268 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
FDFT1P37268 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.07□□□□□ -1.76
FDFT1P37268 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms