Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.31□□□□□ -1.72
COL4A5P29400 HMGB3P20-201ENST00000417997 600 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.31□□□□□ -1.72
COL4A5P29400 AC006480.1-201ENST00000449887 378 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 RPS27AP1-201ENST00000475545 471 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.31□□□□□ -1.72
COL4A5P29400 AC096576.1-201ENST00000489014 359 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.31□□□□□ -1.72
COL4A5P29400 AC021146.3-201ENST00000511911 260 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL4A5P29400 AC011611.1-201ENST00000552179 197 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 AC007066.2-202ENST00000566531 914 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 MIR5680-201ENST00000577577 84 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 MIR4672-201ENST00000583126 81 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.31□□□□□ -1.72
COL4A5P29400 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL4A5P29400 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL4A5P29400 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
COL4A5P29400 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL4A5P29400 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
COL4A5P29400 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL4A5P29400 AC097634.1-201ENST00000604491 2467 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.3□□□□□ -1.72
COL4A5P29400 OR10J6P-201ENST00000289731 930 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 AL357075.1-201ENST00000404107 726 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.3□□□□□ -1.72
COL4A5P29400 BX842559.1-201ENST00000419615 532 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.3□□□□□ -1.72
COL4A5P29400 AC069285.2-201ENST00000440210 275 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.3□□□□□ -1.72
COL4A5P29400 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.3□□□□□ -1.72
COL4A5P29400 AC037198.2-201ENST00000478845 733 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 AC006445.1-201ENST00000491925 405 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.3□□□□□ -1.72
COL4A5P29400 PPBPP1-201ENST00000510807 373 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.3□□□□□ -1.72
COL4A5P29400 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.3□□□□□ -1.72
COL4A5P29400 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.3□□□□□ -1.72
COL4A5P29400 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.3□□□□□ -1.72
COL4A5P29400 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL4A5P29400 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.3□□□□□ -1.72
COL4A5P29400 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.3□□□□□ -1.72
COL4A5P29400 AC006386.2-201ENST00000624491 75 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 AC012005.1-201ENST00000624575 75 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.3□□□□□ -1.72
COL4A5P29400 OR5AC4P-202ENST00000642086 985 ntBASIC4.3□□□□□ -1.72
COL4A5P29400 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.3□□□□□ -1.72
COL4A5P29400 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL4A5P29400 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL4A5P29400 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL4A5P29400 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.3□□□□□ -1.72
COL4A5P29400 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL4A5P29400 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL4A5P29400 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.29□□□□□ -1.72
COL4A5P29400 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 AL603766.1-201ENST00000407763 664 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.29□□□□□ -1.72
COL4A5P29400 HSPE1P27-201ENST00000430808 296 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 TMED11P-201ENST00000479478 690 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 RPS3AP14-201ENST00000483907 780 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 FTH1P24-201ENST00000503502 462 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 UBE2NP1-201ENST00000545592 458 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.29□□□□□ -1.72
COL4A5P29400 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.29□□□□□ -1.72
COL4A5P29400 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.29□□□□□ -1.72
COL4A5P29400 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.29□□□□□ -1.72
COL4A5P29400 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.29□□□□□ -1.72
COL4A5P29400 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
COL4A5P29400 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
COL4A5P29400 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL4A5P29400 LIPT1P1-201ENST00000415870 1186 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.29□□□□□ -1.72
COL4A5P29400 IGKV2-26-201ENST00000518305 343 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.29□□□□□ -1.72
COL4A5P29400 AC005476.1-201ENST00000554427 397 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 AC012603.1-201ENST00000606424 528 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 AL450472.3-201ENST00000615578 367 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 AC127502.3-201ENST00000636170 1206 ntBASIC4.29□□□□□ -1.72
COL4A5P29400 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL4A5P29400 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 SMG1P4-204ENST00000523028 4131 ntBASIC4.28□□□□□ -1.72
COL4A5P29400 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.28□□□□□ -1.72
COL4A5P29400 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.28□□□□□ -1.72
COL4A5P29400 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms