Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AP000563.1-201ENST00000490865 758 ntBASIC3.66□□□□□ -1.82
COL5A1P20908 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.66□□□□□ -1.82
COL5A1P20908 AL669942.2-201ENST00000620352 697 ntBASIC3.66□□□□□ -1.82
COL5A1P20908 AL392088.2-201ENST00000637607 285 ntBASIC3.66□□□□□ -1.82
COL5A1P20908 MTCO1P46-201ENST00000451639 1491 ntBASIC3.66□□□□□ -1.82
COL5A1P20908 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.66□□□□□ -1.82
COL5A1P20908 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.66□□□□□ -1.82
COL5A1P20908 AL035423.1-201ENST00000420331 213 ntBASIC3.65□□□□□ -1.82
COL5A1P20908 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
COL5A1P20908 AL591623.2-201ENST00000449978 222 ntBASIC3.65□□□□□ -1.82
COL5A1P20908 AC017015.1-201ENST00000477387 286 ntBASIC3.65□□□□□ -1.82
COL5A1P20908 FTH1P9-201ENST00000513251 355 ntBASIC3.65□□□□□ -1.82
COL5A1P20908 RNA5SP154-201ENST00000516193 111 ntBASIC3.65□□□□□ -1.82
COL5A1P20908 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.65□□□□□ -1.82
COL5A1P20908 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.65□□□□□ -1.82
COL5A1P20908 AC079880.2-201ENST00000603790 1213 ntBASIC3.65□□□□□ -1.82
COL5A1P20908 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.65□□□□□ -1.82
COL5A1P20908 AC018690.1-201ENST00000608144 626 ntBASIC3.65□□□□□ -1.82
COL5A1P20908 SMG1P4-204ENST00000523028 4131 ntBASIC3.65□□□□□ -1.82
COL5A1P20908 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.65□□□□□ -1.82
COL5A1P20908 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
COL5A1P20908 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.65□□□□□ -1.82
COL5A1P20908 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
COL5A1P20908 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
COL5A1P20908 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC3.65□□□□□ -1.83
COL5A1P20908 LINC01109-201ENST00000603837 3081 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 CDY11P-201ENST00000447168 1651 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL5A1P20908 SNORD74.4-201ENST00000364129 80 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
COL5A1P20908 SOD2P1-201ENST00000396543 562 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 AL031121.1-201ENST00000406553 254 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL5A1P20908 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.65□□□□□ -1.83
COL5A1P20908 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.65□□□□□ -1.83
COL5A1P20908 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.65□□□□□ -1.83
COL5A1P20908 RPL37P3-201ENST00000456825 293 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 RPL5P24-201ENST00000463742 885 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.65□□□□□ -1.83
COL5A1P20908 RN7SL585P-201ENST00000470538 280 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 RPS27AP1-201ENST00000475545 471 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.65□□□□□ -1.83
COL5A1P20908 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.65□□□□□ -1.83
COL5A1P20908 MYL12AP1-201ENST00000518490 515 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.65□□□□□ -1.83
COL5A1P20908 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.65□□□□□ -1.83
COL5A1P20908 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL5A1P20908 OR4A12P-201ENST00000530847 918 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 AL390334.1-201ENST00000556395 450 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.65□□□□□ -1.83
COL5A1P20908 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.65□□□□□ -1.83
COL5A1P20908 AC107294.1-201ENST00000609524 467 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.65□□□□□ -1.83
COL5A1P20908 UBE3AP2-201ENST00000429033 2259 ntBASIC3.65□□□□□ -1.83
COL5A1P20908 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
COL5A1P20908 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL5A1P20908 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A1P20908 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A1P20908 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A1P20908 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A1P20908 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.64□□□□□ -1.83
COL5A1P20908 GNG5P1-201ENST00000255500 204 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 RNU1-33P-201ENST00000364249 162 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 AC234772.1-201ENST00000377927 937 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 U3.26-201ENST00000391236 204 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL5A1P20908 AC127537.2-201ENST00000439258 465 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 SETD6P1-201ENST00000444575 317 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.64□□□□□ -1.83
COL5A1P20908 AC073387.1-201ENST00000453261 709 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 AC006511.1-201ENST00000470614 315 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 RPS26P15-201ENST00000488067 348 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 AC007458.1-201ENST00000542812 373 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.64□□□□□ -1.83
COL5A1P20908 CDY3P-201ENST00000454543 1618 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL5A1P20908 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A1P20908 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.64□□□□□ -1.83
COL5A1P20908 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A1P20908 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A1P20908 AC026523.2-201ENST00000625039 7739 ntBASIC3.64□□□□□ -1.83
COL5A1P20908 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A1P20908 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.64□□□□□ -1.83
COL5A1P20908 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL5A1P20908 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL5A1P20908 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL5A1P20908 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.63□□□□□ -1.83
COL5A1P20908 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL5A1P20908 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.63□□□□□ -1.83
COL5A1P20908 CBX1P3-201ENST00000413296 527 ntBASIC3.63□□□□□ -1.83
COL5A1P20908 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.63□□□□□ -1.83
COL5A1P20908 YWHAQP9-201ENST00000445891 512 ntBASIC3.63□□□□□ -1.83
COL5A1P20908 AC026784.1-201ENST00000507986 352 ntBASIC3.63□□□□□ -1.83
COL5A1P20908 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A1P20908 IGKV2-38-201ENST00000517443 247 ntBASIC3.63□□□□□ -1.83
COL5A1P20908 AC008011.1-201ENST00000545989 227 ntBASIC3.63□□□□□ -1.83
COL5A1P20908 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A1P20908 AC011270.1-201ENST00000558606 583 ntBASIC3.63□□□□□ -1.83
COL5A1P20908 AC012493.2-201ENST00000595083 291 ntBASIC3.63□□□□□ -1.83
COL5A1P20908 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms