Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC112243.1-201ENST00000623949 3851 ntBASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CSB-PGBD3P0DP91 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC007938.2-201ENST00000604666 2634 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 DNM1P47-203ENST00000571780 12667 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 RNY4P14-201ENST00000363656 96 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.356-201ENST00000365475 113 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 RNA5SP88-201ENST00000365560 109 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AL136133.1-201ENST00000413694 376 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC062016.2-201ENST00000420950 676 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 DYNLL1P7-201ENST00000429273 258 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC108463.1-201ENST00000450258 347 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 RN7SL97P-201ENST00000486780 299 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 FAM92A1P1-201ENST00000528023 890 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 PSMB7P1-201ENST00000556349 514 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC012182.1-201ENST00000570133 895 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC133644.2-201ENST00000608142 540 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AC243756.2-201ENST00000618406 463 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 RBPJP2-201ENST00000618187 1444 ntBASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CSB-PGBD3P0DP91 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC023421.1-201ENST00000590535 1785 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC062029.1-202ENST00000606164 3651 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 RN7SKP103-201ENST00000363848 320 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.295-201ENST00000364918 102 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 Y_RNA.326-201ENST00000365176 113 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 RPL23AP29-201ENST00000397284 453 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 EI24P3-201ENST00000399046 1062 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 MIR1302-11-201ENST00000408051 138 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 MIR1302-9-201ENST00000408365 138 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 MIR1302-10-201ENST00000408734 138 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 RN7SKP279-201ENST00000411383 298 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AL139128.1-201ENST00000413921 941 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC048351.1-201ENST00000420064 602 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 HSPD1P12-201ENST00000429127 1069 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC104850.1-201ENST00000435940 476 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 AC093019.1-201ENST00000443135 252 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.49□□□□□ -1.21
CSB-PGBD3P0DP91 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms