Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TAS2R15P-201ENST00000390674 928 ntBASIC4.89□□□□□ -1.63
MMP3P08254 Y_RNA.578-201ENST00000390903 88 ntBASIC4.89□□□□□ -1.63
MMP3P08254 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.89□□□□□ -1.63
MMP3P08254 MFSD13B-201ENST00000420133 1290 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.89□□□□□ -1.63
MMP3P08254 COX6CP15-201ENST00000426313 211 ntBASIC4.89□□□□□ -1.63
MMP3P08254 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.89□□□□□ -1.63
MMP3P08254 RPL21P91-201ENST00000429231 479 ntBASIC4.89□□□□□ -1.63
MMP3P08254 MTCO1P52-201ENST00000433928 531 ntBASIC4.89□□□□□ -1.63
MMP3P08254 SEPT14P24-201ENST00000447236 180 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AL359073.1-201ENST00000448036 403 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.89□□□□□ -1.63
MMP3P08254 SNORD11.1-201ENST00000459482 85 ntBASIC4.89□□□□□ -1.63
MMP3P08254 RPL6P9-201ENST00000466502 859 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AC037198.2-201ENST00000478845 733 ntBASIC4.89□□□□□ -1.63
MMP3P08254 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.89□□□□□ -1.63
MMP3P08254 METTL15P1-201ENST00000481421 1045 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.89□□□□□ -1.63
MMP3P08254 AC010627.1-201ENST00000503819 1294 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.89□□□□□ -1.63
MMP3P08254 RNA5SP303-201ENST00000516192 130 ntBASIC4.89□□□□□ -1.63
MMP3P08254 RNA5SP49-201ENST00000516450 115 ntBASIC4.89□□□□□ -1.63
MMP3P08254 RNU6-1004P-201ENST00000516584 111 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.89□□□□□ -1.63
MMP3P08254 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.89□□□□□ -1.63
MMP3P08254 NDUFS5P6-201ENST00000529136 295 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.89□□□□□ -1.63
MMP3P08254 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.89□□□□□ -1.63
MMP3P08254 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.89□□□□□ -1.63
MMP3P08254 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.89□□□□□ -1.63
MMP3P08254 AP005262.1-201ENST00000582646 997 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AP002906.1-201ENST00000603405 233 ntBASIC4.89□□□□□ -1.63
MMP3P08254 RNF138P2-201ENST00000603490 592 ntBASIC4.89□□□□□ -1.63
MMP3P08254 MIR92B-201ENST00000607575 96 ntBASIC4.89□□□□□ -1.63
MMP3P08254 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
MMP3P08254 SNX18P1Y-201ENST00000616231 511 ntBASIC4.89□□□□□ -1.63
MMP3P08254 AC019226.2-201ENST00000625973 424 ntBASIC4.89□□□□□ -1.63
MMP3P08254 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.89□□□□□ -1.63
MMP3P08254 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.89□□□□□ -1.63
MMP3P08254 CU459211.1-201ENST00000635667 749 ntBASIC4.89□□□□□ -1.63
MMP3P08254 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.89□□□□□ -1.63
MMP3P08254 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
MMP3P08254 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.89□□□□□ -1.63
MMP3P08254 BTBD10P1-201ENST00000549824 1352 ntBASIC4.89□□□□□ -1.63
MMP3P08254 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.89□□□□□ -1.63
MMP3P08254 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
MMP3P08254 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.89□□□□□ -1.63
MMP3P08254 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
MMP3P08254 AC107021.2-201ENST00000567714 2095 ntBASIC4.88□□□□□ -1.63
MMP3P08254 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
MMP3P08254 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.88□□□□□ -1.63
MMP3P08254 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
MMP3P08254 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
MMP3P08254 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
MMP3P08254 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.88□□□□□ -1.63
MMP3P08254 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
MMP3P08254 MAPK10-304ENST00000641341 3984 ntBASIC4.88□□□□□ -1.63
MMP3P08254 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
MMP3P08254 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
MMP3P08254 RNU1-63P-201ENST00000383902 164 ntBASIC4.88□□□□□ -1.63
MMP3P08254 SNORD116-12-201ENST00000384468 92 ntBASIC4.88□□□□□ -1.63
MMP3P08254 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.88□□□□□ -1.63
MMP3P08254 RPS20P14-201ENST00000412545 360 ntBASIC4.88□□□□□ -1.63
MMP3P08254 SETP15-201ENST00000412724 337 ntBASIC4.88□□□□□ -1.63
MMP3P08254 VTA1P1-201ENST00000414044 866 ntBASIC4.88□□□□□ -1.63
MMP3P08254 BTF3P8-201ENST00000414577 526 ntBASIC4.88□□□□□ -1.63
MMP3P08254 LIPT1P1-201ENST00000415870 1186 ntBASIC4.88□□□□□ -1.63
MMP3P08254 OR2X1P-201ENST00000421144 687 ntBASIC4.88□□□□□ -1.63
MMP3P08254 BTF3P10-201ENST00000433415 495 ntBASIC4.88□□□□□ -1.63
MMP3P08254 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.88□□□□□ -1.63
MMP3P08254 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.88□□□□□ -1.63
MMP3P08254 VN1R25P-201ENST00000443385 738 ntBASIC4.88□□□□□ -1.63
MMP3P08254 HSFY6P-201ENST00000445573 403 ntBASIC4.88□□□□□ -1.63
MMP3P08254 AL589765.3-201ENST00000446084 462 ntBASIC4.88□□□□□ -1.63
MMP3P08254 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.88□□□□□ -1.63
MMP3P08254 AC244505.3-201ENST00000454598 187 ntBASIC4.88□□□□□ -1.63
MMP3P08254 PTGES3P5-201ENST00000455109 434 ntBASIC4.88□□□□□ -1.63
MMP3P08254 RPS4XP12-201ENST00000461747 709 ntBASIC4.88□□□□□ -1.63
MMP3P08254 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.88□□□□□ -1.63
MMP3P08254 RN7SL812P-201ENST00000493791 279 ntBASIC4.88□□□□□ -1.63
MMP3P08254 ATP1B1P1-201ENST00000509767 915 ntBASIC4.88□□□□□ -1.63
MMP3P08254 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.88□□□□□ -1.63
MMP3P08254 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.88□□□□□ -1.63
MMP3P08254 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.88□□□□□ -1.63
MMP3P08254 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.88□□□□□ -1.63
MMP3P08254 OR5BC1P-201ENST00000529327 739 ntBASIC4.88□□□□□ -1.63
MMP3P08254 AC006518.2-201ENST00000542513 940 ntBASIC4.88□□□□□ -1.63
MMP3P08254 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.88□□□□□ -1.63
MMP3P08254 TVP23BP1-201ENST00000557500 617 ntBASIC4.88□□□□□ -1.63
MMP3P08254 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.88□□□□□ -1.63
MMP3P08254 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.88□□□□□ -1.63
MMP3P08254 AC245036.5-201ENST00000596330 847 ntBASIC4.88□□□□□ -1.63
MMP3P08254 AC113368.1-201ENST00000603736 382 ntBASIC4.88□□□□□ -1.63
MMP3P08254 ELOCP35-201ENST00000604289 336 ntBASIC4.88□□□□□ -1.63
MMP3P08254 AL354984.3-201ENST00000604803 325 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms