Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CD74P04233 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CD74P04233 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.44□□□□□ -1.86
CD74P04233 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 EIF2AP4-201ENST00000424793 1781 ntBASIC3.44□□□□□ -1.86
CD74P04233 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CD74P04233 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CD74P04233 MIR421-201ENST00000365696 85 ntBASIC3.44□□□□□ -1.86
CD74P04233 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.44□□□□□ -1.86
CD74P04233 MIR124-3-201ENST00000384866 87 ntBASIC3.44□□□□□ -1.86
CD74P04233 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.44□□□□□ -1.86
CD74P04233 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.44□□□□□ -1.86
CD74P04233 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.44□□□□□ -1.86
CD74P04233 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.44□□□□□ -1.86
CD74P04233 AL359265.2-201ENST00000434367 631 ntBASIC3.44□□□□□ -1.86
CD74P04233 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.44□□□□□ -1.86
CD74P04233 USP9YP7-201ENST00000436723 430 ntBASIC3.44□□□□□ -1.86
CD74P04233 RPL23AP52-201ENST00000439311 478 ntBASIC3.44□□□□□ -1.86
CD74P04233 ARL5AP3-201ENST00000439327 386 ntBASIC3.44□□□□□ -1.86
CD74P04233 AC092809.1-201ENST00000441469 474 ntBASIC3.44□□□□□ -1.86
CD74P04233 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.44□□□□□ -1.86
CD74P04233 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.44□□□□□ -1.86
CD74P04233 EIF2S2P2-201ENST00000447161 982 ntBASIC3.44□□□□□ -1.86
CD74P04233 MORF4L1P4-201ENST00000450245 976 ntBASIC3.44□□□□□ -1.86
CD74P04233 CEACAMP6-201ENST00000452007 574 ntBASIC3.44□□□□□ -1.86
CD74P04233 USP9YP32-201ENST00000452432 430 ntBASIC3.44□□□□□ -1.86
CD74P04233 ANP32BP2-201ENST00000454525 545 ntBASIC3.44□□□□□ -1.86
CD74P04233 MTCO3P20-201ENST00000454926 688 ntBASIC3.44□□□□□ -1.86
CD74P04233 RPS29P33-201ENST00000456717 146 ntBASIC3.44□□□□□ -1.86
CD74P04233 AC109327.1-201ENST00000471666 403 ntBASIC3.44□□□□□ -1.86
CD74P04233 AC006463.2-201ENST00000473326 348 ntBASIC3.44□□□□□ -1.86
CD74P04233 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.44□□□□□ -1.86
CD74P04233 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.44□□□□□ -1.86
CD74P04233 AC093824.1-201ENST00000508796 343 ntBASIC3.44□□□□□ -1.86
CD74P04233 ACTR6P1-201ENST00000514311 1104 ntBASIC3.44□□□□□ -1.86
CD74P04233 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.44□□□□□ -1.86
CD74P04233 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.44□□□□□ -1.86
CD74P04233 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.44□□□□□ -1.86
CD74P04233 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.44□□□□□ -1.86
CD74P04233 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.44□□□□□ -1.86
CD74P04233 RPL23AP87-202ENST00000573039 466 ntBASIC3.44□□□□□ -1.86
CD74P04233 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.44□□□□□ -1.86
CD74P04233 AC012417.1-201ENST00000582307 1039 ntBASIC3.44□□□□□ -1.86
CD74P04233 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.44□□□□□ -1.86
CD74P04233 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.44□□□□□ -1.86
CD74P04233 AC244505.7-201ENST00000599675 272 ntBASIC3.44□□□□□ -1.86
CD74P04233 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.44□□□□□ -1.86
CD74P04233 FAM27D1-201ENST00000612308 341 ntBASIC3.44□□□□□ -1.86
CD74P04233 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CD74P04233 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.44□□□□□ -1.86
CD74P04233 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CD74P04233 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.44□□□□□ -1.86
CD74P04233 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CD74P04233 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.43□□□□□ -1.86
CD74P04233 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.43□□□□□ -1.86
CD74P04233 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CD74P04233 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CD74P04233 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CD74P04233 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.43□□□□□ -1.86
CD74P04233 AC079741.1-201ENST00000321498 212 ntBASIC3.43□□□□□ -1.86
CD74P04233 RNU1-14P-201ENST00000362759 152 ntBASIC3.43□□□□□ -1.86
CD74P04233 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CD74P04233 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.43□□□□□ -1.86
CD74P04233 ATP5F1P4-201ENST00000397288 746 ntBASIC3.43□□□□□ -1.86
CD74P04233 RN7SKP235-201ENST00000410662 305 ntBASIC3.43□□□□□ -1.86
CD74P04233 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.43□□□□□ -1.86
CD74P04233 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.43□□□□□ -1.86
CD74P04233 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.43□□□□□ -1.86
CD74P04233 AL356806.1-201ENST00000422524 916 ntBASIC3.43□□□□□ -1.86
CD74P04233 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.43□□□□□ -1.86
CD74P04233 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 AC073264.2-201ENST00000448886 166 ntBASIC3.43□□□□□ -1.86
CD74P04233 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.43□□□□□ -1.86
CD74P04233 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 RPL12P20-201ENST00000475538 479 ntBASIC3.43□□□□□ -1.86
CD74P04233 AC004069.2-201ENST00000505438 1114 ntBASIC3.43□□□□□ -1.86
CD74P04233 SNX5P1-201ENST00000505757 1041 ntBASIC3.43□□□□□ -1.86
CD74P04233 OR7H2P-201ENST00000513483 306 ntBASIC3.43□□□□□ -1.86
CD74P04233 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.43□□□□□ -1.86
CD74P04233 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.43□□□□□ -1.86
CD74P04233 AC008083.2-201ENST00000546707 476 ntBASIC3.43□□□□□ -1.86
CD74P04233 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.43□□□□□ -1.86
CD74P04233 AC067805.1-201ENST00000559344 470 ntBASIC3.43□□□□□ -1.86
CD74P04233 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.43□□□□□ -1.86
CD74P04233 AGGF1P8-201ENST00000562979 1000 ntBASIC3.43□□□□□ -1.86
CD74P04233 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.43□□□□□ -1.86
CD74P04233 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.43□□□□□ -1.86
CD74P04233 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms