Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NIPA2P2-201ENST00000496376 1083 ntBASIC4.13□□□□□ -1.75
APOEP02649 AC109458.1-201ENST00000508858 316 ntBASIC4.13□□□□□ -1.75
APOEP02649 USP9YP5-201ENST00000511770 630 ntBASIC4.13□□□□□ -1.75
APOEP02649 RNA5SP179-201ENST00000517284 121 ntBASIC4.13□□□□□ -1.75
APOEP02649 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.13□□□□□ -1.75
APOEP02649 AC084824.1-201ENST00000550917 1005 ntBASIC4.13□□□□□ -1.75
APOEP02649 GNRHR2P1-201ENST00000555315 631 ntBASIC4.13□□□□□ -1.75
APOEP02649 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.13□□□□□ -1.75
APOEP02649 AC141257.3-201ENST00000572906 215 ntBASIC4.13□□□□□ -1.75
APOEP02649 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.13□□□□□ -1.75
APOEP02649 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.13□□□□□ -1.75
APOEP02649 AC053481.4-201ENST00000583164 216 ntBASIC4.13□□□□□ -1.75
APOEP02649 AP000255.1-201ENST00000610276 676 ntBASIC4.13□□□□□ -1.75
APOEP02649 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.13□□□□□ -1.75
APOEP02649 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.13□□□□□ -1.75
APOEP02649 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
APOEP02649 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
APOEP02649 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.13□□□□□ -1.75
APOEP02649 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
APOEP02649 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
APOEP02649 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.13□□□□□ -1.75
APOEP02649 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
APOEP02649 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.13□□□□□ -1.75
APOEP02649 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.12□□□□□ -1.75
APOEP02649 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOEP02649 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.12□□□□□ -1.75
APOEP02649 RNA5SP399-201ENST00000364003 117 ntBASIC4.12□□□□□ -1.75
APOEP02649 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.12□□□□□ -1.75
APOEP02649 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.12□□□□□ -1.75
APOEP02649 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.12□□□□□ -1.75
APOEP02649 TBCAP1-201ENST00000436520 327 ntBASIC4.12□□□□□ -1.75
APOEP02649 OR52Y1P-201ENST00000452418 828 ntBASIC4.12□□□□□ -1.75
APOEP02649 STRADBP1-201ENST00000478954 1281 ntBASIC4.12□□□□□ -1.75
APOEP02649 AP000926.1-201ENST00000479573 241 ntBASIC4.12□□□□□ -1.75
APOEP02649 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.12□□□□□ -1.75
APOEP02649 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.12□□□□□ -1.75
APOEP02649 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOEP02649 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.12□□□□□ -1.75
APOEP02649 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.12□□□□□ -1.75
APOEP02649 AC005255.1-201ENST00000593748 216 ntBASIC4.12□□□□□ -1.75
APOEP02649 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.12□□□□□ -1.75
APOEP02649 AL020997.2-201ENST00000602607 184 ntBASIC4.12□□□□□ -1.75
APOEP02649 AC091167.4-201ENST00000605079 184 ntBASIC4.12□□□□□ -1.75
APOEP02649 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.12□□□□□ -1.75
APOEP02649 AP003392.5-201ENST00000607857 415 ntBASIC4.12□□□□□ -1.75
APOEP02649 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.12□□□□□ -1.75
APOEP02649 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.12□□□□□ -1.75
APOEP02649 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.12□□□□□ -1.75
APOEP02649 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.12□□□□□ -1.75
APOEP02649 AC007342.7-201ENST00000624610 2337 ntBASIC4.12□□□□□ -1.75
APOEP02649 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOEP02649 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOEP02649 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOEP02649 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
APOEP02649 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
APOEP02649 EXOC5P1-201ENST00000510543 1969 ntBASIC4.11□□□□□ -1.75
APOEP02649 BDP1P-201ENST00000582658 1990 ntBASIC4.11□□□□□ -1.75
APOEP02649 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.11□□□□□ -1.75
APOEP02649 RNA5SP97-201ENST00000365006 84 ntBASIC4.11□□□□□ -1.75
APOEP02649 RAB9AP4-201ENST00000415230 609 ntBASIC4.11□□□□□ -1.75
APOEP02649 MTND4LP13-201ENST00000425022 298 ntBASIC4.11□□□□□ -1.75
APOEP02649 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.11□□□□□ -1.75
APOEP02649 RPL7P2-201ENST00000427639 268 ntBASIC4.11□□□□□ -1.75
APOEP02649 FTH1P6-201ENST00000430768 320 ntBASIC4.11□□□□□ -1.75
APOEP02649 AC087650.1-201ENST00000431445 468 ntBASIC4.11□□□□□ -1.75
APOEP02649 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.11□□□□□ -1.75
APOEP02649 AL356535.1-201ENST00000440335 398 ntBASIC4.11□□□□□ -1.75
APOEP02649 MTND2P25-201ENST00000449028 610 ntBASIC4.11□□□□□ -1.75
APOEP02649 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.11□□□□□ -1.75
APOEP02649 RPL21P11-201ENST00000461458 483 ntBASIC4.11□□□□□ -1.75
APOEP02649 PPIAP15-201ENST00000479662 484 ntBASIC4.11□□□□□ -1.75
APOEP02649 RPS4XP15-201ENST00000489210 795 ntBASIC4.11□□□□□ -1.75
APOEP02649 AC069499.1-201ENST00000489433 509 ntBASIC4.11□□□□□ -1.75
APOEP02649 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOEP02649 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.11□□□□□ -1.75
APOEP02649 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.11□□□□□ -1.75
APOEP02649 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.11□□□□□ -1.75
APOEP02649 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.11□□□□□ -1.75
APOEP02649 AL360157.1-201ENST00000565962 87 ntBASIC4.11□□□□□ -1.75
APOEP02649 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.11□□□□□ -1.75
APOEP02649 MTND2P13-201ENST00000577438 1039 ntBASIC4.11□□□□□ -1.75
APOEP02649 AC022916.3-201ENST00000592961 742 ntBASIC4.11□□□□□ -1.75
APOEP02649 AP003072.5-201ENST00000623872 773 ntBASIC4.11□□□□□ -1.75
APOEP02649 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
APOEP02649 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOEP02649 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.11□□□□□ -1.75
APOEP02649 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOEP02649 PHKBP1-201ENST00000450951 1951 ntBASIC4.11□□□□□ -1.75
APOEP02649 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOEP02649 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.1□□□□□ -1.75
APOEP02649 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
APOEP02649 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.1□□□□□ -1.75
APOEP02649 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.1□□□□□ -1.75
APOEP02649 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
APOEP02649 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
APOEP02649 MIR423-201ENST00000362201 94 ntBASIC4.1□□□□□ -1.75
APOEP02649 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.1□□□□□ -1.75
APOEP02649 Z97055.1-201ENST00000419730 712 ntBASIC4.1□□□□□ -1.75
APOEP02649 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.1□□□□□ -1.75
APOEP02649 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms