Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SPTA1P02549 RIOK3P1-201ENST00000418778 1528 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.45□□□□□ -1.86
SPTA1P02549 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SPTA1P02549 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SPTA1P02549 MIR422A-201ENST00000362286 90 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 SNORD3H-201ENST00000384486 214 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.45□□□□□ -1.86
SPTA1P02549 AC087650.1-201ENST00000431445 468 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.45□□□□□ -1.86
SPTA1P02549 AC103783.1-201ENST00000520506 373 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.45□□□□□ -1.86
SPTA1P02549 AC127024.5-201ENST00000580085 462 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AC244505.7-201ENST00000599675 272 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AL354760.1-201ENST00000608357 643 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AL157762.1-201ENST00000619612 415 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SPTA1P02549 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.45□□□□□ -1.86
SPTA1P02549 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SPTA1P02549 MAPK10-373ENST00000641983 6772 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 NAMPTP1-201ENST00000440465 2514 ntBASIC3.45□□□□□ -1.86
SPTA1P02549 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.45□□□□□ -1.86
SPTA1P02549 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
SPTA1P02549 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
SPTA1P02549 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SPTA1P02549 RPL21P10-201ENST00000463521 490 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 SETP14-201ENST00000497538 873 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.44□□□□□ -1.86
SPTA1P02549 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.44□□□□□ -1.86
SPTA1P02549 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.44□□□□□ -1.86
SPTA1P02549 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.44□□□□□ -1.86
SPTA1P02549 AC138932.5-201ENST00000617759 563 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 AL392088.2-201ENST00000637607 285 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
SPTA1P02549 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.44□□□□□ -1.86
SPTA1P02549 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.44□□□□□ -1.86
SPTA1P02549 CDY3P-201ENST00000454543 1618 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.44□□□□□ -1.86
SPTA1P02549 HSFY4P-201ENST00000415994 1181 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 AL158071.1-201ENST00000430315 461 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 UBE2V1P1-201ENST00000430836 445 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.44□□□□□ -1.86
SPTA1P02549 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SPTA1P02549 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SPTA1P02549 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.44□□□□□ -1.86
SPTA1P02549 AC096576.1-201ENST00000489014 359 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.44□□□□□ -1.86
SPTA1P02549 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.44□□□□□ -1.86
SPTA1P02549 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SPTA1P02549 AC079171.1-201ENST00000568788 914 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 AC025627.2-201ENST00000576220 160 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 AC026368.1-201ENST00000614934 690 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SPTA1P02549 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SPTA1P02549 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SPTA1P02549 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.44□□□□□ -1.86
SPTA1P02549 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.44□□□□□ -1.86
SPTA1P02549 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SPTA1P02549 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SPTA1P02549 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SPTA1P02549 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
SPTA1P02549 OR6K3-202ENST00000368146 996 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 RNA5SP120-201ENST00000410900 112 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.43□□□□□ -1.86
SPTA1P02549 DPY19L1P2-201ENST00000426647 915 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 AL591419.1-201ENST00000427423 339 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 snoU109.6-201ENST00000516831 118 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.43□□□□□ -1.86
SPTA1P02549 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.43□□□□□ -1.86
SPTA1P02549 NPM1P5-201ENST00000557228 838 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 RPL23AP87-202ENST00000573039 466 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.43□□□□□ -1.86
SPTA1P02549 AC103881.1-201ENST00000603476 538 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.43□□□□□ -1.86
SPTA1P02549 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SPTA1P02549 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SPTA1P02549 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.43□□□□□ -1.86
SPTA1P02549 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SPTA1P02549 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SPTA1P02549 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SPTA1P02549 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.43□□□□□ -1.86
SPTA1P02549 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 RPL23AP25-201ENST00000430973 463 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 AL358472.1-201ENST00000431295 329 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 AL445433.1-201ENST00000457507 257 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 RPL23AP12-201ENST00000467573 473 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.43□□□□□ -1.86
SPTA1P02549 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.43□□□□□ -1.86
SPTA1P02549 AC008802.1-201ENST00000519121 791 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.43□□□□□ -1.86
SPTA1P02549 AC103843.2-201ENST00000530523 682 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.43□□□□□ -1.86
SPTA1P02549 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.43□□□□□ -1.86
SPTA1P02549 AC007066.2-202ENST00000566531 914 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.43□□□□□ -1.86
SPTA1P02549 ZNF962P-201ENST00000443465 3140 ntBASIC3.43□□□□□ -1.86
SPTA1P02549 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SPTA1P02549 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SPTA1P02549 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms