Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL627171.1-201ENST00000618845 1308 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 ASNSP1-204ENST00000641977 1664 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 OR4A15-201ENST00000314706 1035 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.26□□□□□ -1.73
CTDNEP1O95476 RNU6-1263P-201ENST00000384601 106 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTDNEP1O95476 MTHFD2P2-201ENST00000407725 247 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC017079.2-201ENST00000416102 485 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC002075.2-201ENST00000425207 252 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.26□□□□□ -1.73
CTDNEP1O95476 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC099560.2-201ENST00000457554 255 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC084357.1-201ENST00000473404 255 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 TRBV8-1-201ENST00000481590 279 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC093267.1-201ENST00000489176 961 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 HMGB3P13-201ENST00000511263 607 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 NPM1P41-201ENST00000512920 831 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 RN7SKP141-201ENST00000516167 338 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AP006245.1-201ENST00000522549 120 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC084824.1-201ENST00000550917 1005 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 MIR5685-201ENST00000579080 79 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AL163642.2-201ENST00000604722 1019 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC023813.4-201ENST00000607580 580 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC099676.1-201ENST00000608886 657 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC006946.3-201ENST00000609791 756 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC005344.1-201ENST00000613391 459 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC016717.3-201ENST00000624730 554 ntBASIC4.26□□□□□ -1.73
CTDNEP1O95476 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CTDNEP1O95476 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTDNEP1O95476 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
CTDNEP1O95476 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTDNEP1O95476 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTDNEP1O95476 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.26□□□□□ -1.73
CTDNEP1O95476 AC010300.1-201ENST00000600671 5134 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 AP004289.2-201ENST00000444413 1457 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTDNEP1O95476 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTDNEP1O95476 AC009302.1-201ENST00000417147 390 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 MTND2P15-201ENST00000418575 892 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 AC245054.1-201ENST00000420944 258 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 OR6C71P-201ENST00000432580 913 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 MTCO3P16-201ENST00000454456 754 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTDNEP1O95476 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 AC006511.1-201ENST00000470614 315 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 TRAV15-201ENST00000556680 249 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.25□□□□□ -1.73
CTDNEP1O95476 AP000553.6-201ENST00000641242 118 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 AC119674.1-207ENST00000641355 633 ntBASIC4.25□□□□□ -1.73
CTDNEP1O95476 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTDNEP1O95476 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTDNEP1O95476 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTDNEP1O95476 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTDNEP1O95476 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 SNORD3H-201ENST00000384486 214 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC007066.1-201ENST00000392902 381 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 RPL32P23-201ENST00000397237 405 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 HMGB3P10-201ENST00000434734 572 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AL138787.1-202ENST00000437804 898 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 FGF7P3-201ENST00000454645 303 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 MTCO3P20-201ENST00000454926 688 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC099563.1-201ENST00000456086 418 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 NPM1P17-201ENST00000479221 602 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 RPS3AP50-201ENST00000487064 803 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 PRELID3BP5-201ENST00000508612 460 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTDNEP1O95476 AL121839.1-201ENST00000556233 1185 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 MIR4738-201ENST00000579134 87 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC107982.3-201ENST00000584957 985 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC015911.5-201ENST00000587076 451 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AP001542.1-201ENST00000591314 200 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 AC092653.1-201ENST00000608509 531 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms