Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC023632.1-201ENST00000518463 375 ntBASIC4.29□□□□□ -1.72
SSX4O60224 RAB9BP1-201ENST00000519581 626 ntBASIC4.29□□□□□ -1.72
SSX4O60224 OR8G5-201ENST00000524943 1041 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX4O60224 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX4O60224 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX4O60224 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX4O60224 AC004217.3-201ENST00000551552 878 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX4O60224 AC044913.1-201ENST00000557200 430 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX4O60224 BGLT3-201ENST00000564523 994 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AP005119.2-201ENST00000579735 1105 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX4O60224 AC011453.2-201ENST00000603737 729 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC093765.1-201ENST00000603758 881 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC069304.3-201ENST00000603938 1084 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC091488.1-201ENST00000604239 660 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC106052.1-201ENST00000608029 497 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AP004247.3-201ENST00000608682 624 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC009237.15-201ENST00000610252 501 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC015813.4-201ENST00000610469 179 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AL158196.1-201ENST00000616786 434 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC010975.3-201ENST00000618727 978 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC109454.4-201ENST00000623411 649 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC055839.1-201ENST00000634467 498 ntBASIC4.29□□□□□ -1.72
SSX4O60224 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX4O60224 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.29□□□□□ -1.72
SSX4O60224 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX4O60224 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX4O60224 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SSX4O60224 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX4O60224 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SSX4O60224 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SSX4O60224 AC005261.4-201ENST00000600047 1385 ntBASIC4.28□□□□□ -1.72
SSX4O60224 SDAD1P1-202ENST00000524156 2051 ntBASIC4.28□□□□□ -1.72
SSX4O60224 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 OR10J6P-201ENST00000289731 930 ntBASIC4.28□□□□□ -1.72
SSX4O60224 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SSX4O60224 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SSX4O60224 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SSX4O60224 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX4O60224 RNU4-51P-201ENST00000364206 140 ntBASIC4.28□□□□□ -1.72
SSX4O60224 SNORA2.3-201ENST00000383920 135 ntBASIC4.28□□□□□ -1.72
SSX4O60224 SNORD116-12-201ENST00000384468 92 ntBASIC4.28□□□□□ -1.72
SSX4O60224 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SSX4O60224 RPS4XP9-201ENST00000405151 780 ntBASIC4.28□□□□□ -1.72
SSX4O60224 RPS16P5-201ENST00000406501 404 ntBASIC4.28□□□□□ -1.72
SSX4O60224 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX4O60224 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX4O60224 EIF4EP1-201ENST00000422311 642 ntBASIC4.28□□□□□ -1.72
SSX4O60224 AC092648.1-201ENST00000425870 423 ntBASIC4.28□□□□□ -1.72
SSX4O60224 IPMKP1-201ENST00000425988 855 ntBASIC4.28□□□□□ -1.72
SSX4O60224 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 AC092017.2-201ENST00000427600 362 ntBASIC4.28□□□□□ -1.72
SSX4O60224 RPL37P1-201ENST00000432310 284 ntBASIC4.28□□□□□ -1.72
SSX4O60224 RPS20P1-201ENST00000434853 354 ntBASIC4.28□□□□□ -1.72
SSX4O60224 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX4O60224 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX4O60224 AL450023.3-201ENST00000440592 271 ntBASIC4.28□□□□□ -1.72
SSX4O60224 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 OR52J1P-201ENST00000450596 932 ntBASIC4.28□□□□□ -1.72
SSX4O60224 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 RN7SL481P-201ENST00000477764 299 ntBASIC4.28□□□□□ -1.72
SSX4O60224 MTND6P6-201ENST00000478031 263 ntBASIC4.28□□□□□ -1.72
SSX4O60224 RN7SL459P-201ENST00000481078 302 ntBASIC4.28□□□□□ -1.72
SSX4O60224 IGLV2-34-201ENST00000490007 283 ntBASIC4.28□□□□□ -1.72
SSX4O60224 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 RNA5SP43-201ENST00000516559 110 ntBASIC4.28□□□□□ -1.72
SSX4O60224 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX4O60224 AF279873.1-201ENST00000523393 313 ntBASIC4.28□□□□□ -1.72
SSX4O60224 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX4O60224 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX4O60224 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX4O60224 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX4O60224 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX4O60224 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX4O60224 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 MIR3667-201ENST00000581025 74 ntBASIC4.28□□□□□ -1.72
SSX4O60224 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX4O60224 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX4O60224 AL445435.1-201ENST00000604232 665 ntBASIC4.28□□□□□ -1.72
SSX4O60224 AP005137.2-201ENST00000609238 400 ntBASIC4.28□□□□□ -1.72
SSX4O60224 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX4O60224 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SSX4O60224 MIR6810-201ENST00000622701 70 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms