Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC099654.2-201ENST00000433031 1980 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXN3O00409 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXN3O00409 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXN3O00409 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
FOXN3O00409 SALL4P2-201ENST00000423288 2910 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
FOXN3O00409 OR52B1P-201ENST00000316506 909 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RN7SKP95-201ENST00000362860 303 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RNA5SP391-201ENST00000363456 119 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RNU6-1066P-201ENST00000363573 105 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RNU6-560P-201ENST00000364007 108 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AL139098.1-201ENST00000407291 389 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RPL31P52-201ENST00000407532 367 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 DPPA2P3-201ENST00000411853 655 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 E2F6P2-201ENST00000420708 748 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RPL12P34-201ENST00000424532 479 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXN3O00409 USP9YP31-201ENST00000431405 881 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RPS6P15-201ENST00000431996 751 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
FOXN3O00409 SETP8-201ENST00000435341 628 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 YWHAZP8-201ENST00000436935 731 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 MTND3P1-201ENST00000441336 220 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXN3O00409 EEF1A1P1-201ENST00000447052 739 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RPS27AP15-201ENST00000447672 466 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RPL21P134-201ENST00000453468 483 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXN3O00409 NF1P3-201ENST00000457709 450 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 PNPLA4P1-201ENST00000458328 305 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
FOXN3O00409 RPSAP50-201ENST00000481955 852 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXN3O00409 SETP14-201ENST00000497538 873 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.2□□□□□ -1.58
FOXN3O00409 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
FOXN3O00409 AP001189.2-201ENST00000527320 189 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.2□□□□□ -1.58
FOXN3O00409 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXN3O00409 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXN3O00409 PDCL2P2-201ENST00000533651 189 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 DUXAP6-201ENST00000553858 601 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.2□□□□□ -1.58
FOXN3O00409 AC093249.4-201ENST00000564755 259 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXN3O00409 RN7SL435P-201ENST00000584418 282 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXN3O00409 AC146944.4-201ENST00000602697 718 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AL354760.1-201ENST00000608357 643 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AC007497.1-201ENST00000610421 561 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 EIF3FP1-201ENST00000613970 806 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXN3O00409 AC007490.1-201ENST00000624321 703 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AP003072.4-201ENST00000624580 310 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AC116618.1-201ENST00000634617 774 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 AC068620.4-201ENST00000636730 1182 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXN3O00409 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXN3O00409 AC109780.1-201ENST00000451768 1344 ntBASIC5.2□□□□□ -1.58
FOXN3O00409 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXN3O00409 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 AC120338.1-201ENST00000625074 1541 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXN3O00409 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 RNA5SP305-201ENST00000362665 119 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 RNU5D-1-201ENST00000363299 116 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 Y_RNA.169-201ENST00000363745 96 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
FOXN3O00409 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXN3O00409 RNA5SP80-201ENST00000410475 111 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 AL139421.1-201ENST00000423010 169 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AL645608.4-201ENST00000423619 154 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 AC010881.1-201ENST00000433830 235 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXN3O00409 AC093414.1-201ENST00000434712 514 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXN3O00409 AL008629.1-201ENST00000438615 184 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 ANKRD26P4-201ENST00000455755 950 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AL133477.1-201ENST00000457472 514 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXN3O00409 MTND2P14-201ENST00000482139 351 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 RN7SL214P-201ENST00000487317 265 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 RPL30P11-201ENST00000495304 339 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AC021146.8-201ENST00000507455 733 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 401.2 ms