Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 AL121766.1-201ENST00000547436 487 ntBASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 AL590392.1-201ENST00000604960 446 ntBASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 MIR378J-201ENST00000611988 109 ntBASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 AC004825.2-201ENST00000616634 455 ntBASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRAV27A0A087WT01 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.34□□□□□ -1.88
TRAV27A0A087WT01 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.34□□□□□ -1.88
TRAV27A0A087WT01 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
TRAV27A0A087WT01 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRAV27A0A087WT01 SAGE2P-201ENST00000420011 2126 ntBASIC3.34□□□□□ -1.88
TRAV27A0A087WT01 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRAV27A0A087WT01 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AL049555.1-201ENST00000562834 1933 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 MIR141-201ENST00000384975 95 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 SNORA3.3-201ENST00000408712 125 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AL691447.1-201ENST00000419456 387 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC002075.2-201ENST00000425207 252 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 DPY19L1P2-201ENST00000426647 915 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AL645931.1-201ENST00000439737 410 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 IFNWP4-201ENST00000453148 294 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 UBDP1-202ENST00000457888 382 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC010460.1-201ENST00000507087 466 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AGGF1P6-201ENST00000569213 976 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC087499.8-201ENST00000578406 226 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC025946.2-201ENST00000603398 234 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AL135786.2-201ENST00000608422 615 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC083809.1-201ENST00000615051 472 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 MIR6875-201ENST00000617506 72 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 AC024560.2-201ENST00000507981 1497 ntBASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.33□□□□□ -1.88
TRAV27A0A087WT01 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AL365396.1-201ENST00000430854 671 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC009263.1-201ENST00000441193 1239 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 HSFY6P-201ENST00000445573 403 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 RPS29P31-201ENST00000446147 164 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 RPS3AP50-201ENST00000487064 803 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC021146.1-201ENST00000511202 716 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC023161.2-201ENST00000551218 780 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 HNRNPCP4-201ENST00000571636 900 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 MIR6748-201ENST00000610433 71 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AP000553.6-201ENST00000641242 118 ntBASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRAV27A0A087WT01 AC007656.2-201ENST00000624902 4547 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms