Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AL589647.1-201ENST00000402485 466 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 RNA5SP498-201ENST00000411342 120 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC105402.1-201ENST00000413336 545 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC009963.2-201ENST00000453431 138 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AL109741.2-201ENST00000455561 343 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 SYPL1P1-201ENST00000473622 768 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC091959.2-201ENST00000477363 321 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC025260.1-201ENST00000548858 430 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AL031281.1-201ENST00000604049 488 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC072039.2-201ENST00000608883 439 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC105227.2-201ENST00000615075 605 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC068792.1-201ENST00000621354 417 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 Z69908.1-201ENST00000622603 247 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AC010608.2-201ENST00000624830 470 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
DKK3Q9UBP4 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 AL731532.2-201ENST00000623542 1953 ntBASIC5.15□□□□□ -1.59
DKK3Q9UBP4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 RNU6-666P-201ENST00000363499 107 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 Y_RNA.192-201ENST00000363977 102 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 RNU6-553P-201ENST00000364047 96 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC098592.1-201ENST00000419352 333 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC010153.1-201ENST00000432862 727 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 GTF2IP7-202ENST00000436677 309 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 PSMD10P3-201ENST00000437000 448 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 MTND1P34-201ENST00000438556 671 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AL606662.1-201ENST00000445763 553 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 TPT1P13-201ENST00000449760 499 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 RN7SL443P-201ENST00000464331 290 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC007686.1-201ENST00000488511 463 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 RN7SL244P-201ENST00000493405 297 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 ARL4AP1-201ENST00000503220 705 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 COX6B1P5-201ENST00000509843 249 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC104108.1-201ENST00000509930 412 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC016559.2-201ENST00000510759 359 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AL117351.2-201ENST00000513571 157 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC027369.5-201ENST00000533838 755 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AP000619.3-201ENST00000535634 1127 ntBASIC5.14□□□□□ -1.59
DKK3Q9UBP4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.14□□□□□ -1.59
DKK3Q9UBP4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms