Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC109481.1-201ENST00000509173 282 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 RNA5SP278-201ENST00000517055 102 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 HMGB1P19-201ENST00000517578 577 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 IGKV2D-38-201ENST00000518423 240 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC140063.1-201ENST00000541343 259 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 NCAPGP2-201ENST00000557911 754 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 MIR378C-201ENST00000578683 81 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 MIR3157-201ENST00000578688 85 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 MIR4312-201ENST00000579909 76 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC245389.1-201ENST00000605141 529 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC100812.1-201ENST00000607622 580 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 BX664608.1-201ENST00000610519 487 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 MIR6861-201ENST00000618657 64 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 MRPL57P3-201ENST00000619218 176 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC137590.2-201ENST00000619709 240 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 SNORA16A-202ENST00000628458 135 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC008957.3-201ENST00000624112 2242 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 WBP11P1-201ENST00000562560 1931 ntBASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CUEDC1Q9NWM3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 Y_RNA.307-201ENST00000365022 117 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RN7SKP189-201ENST00000365042 330 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RNA5SP279-201ENST00000365513 117 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RNU6-1013P-201ENST00000384180 107 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 Y_RNA.552-201ENST00000384665 112 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 BTBD10P2-201ENST00000404779 676 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RNU2-9P-201ENST00000410194 145 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RNU4-26P-201ENST00000410270 107 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 Y_RNA.615-201ENST00000410769 117 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AL807761.1-201ENST00000417622 171 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC092634.6-201ENST00000418558 192 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 UQCRBP1-201ENST00000421129 336 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RGS17P1-201ENST00000423358 553 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AL590128.1-201ENST00000433407 286 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 PRPF38AP1-201ENST00000451976 933 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 ELOCP24-201ENST00000456370 334 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RN7SL216P-201ENST00000471607 298 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RN7SL654P-201ENST00000479178 292 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AL163973.1-201ENST00000484753 577 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC095057.1-201ENST00000507583 168 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 TTC39CP1-201ENST00000512513 755 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC022616.6-201ENST00000520479 119 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AP000676.2-201ENST00000529711 301 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AL591767.3-201ENST00000554632 525 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC243773.3-201ENST00000613270 256 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC131009.3-201ENST00000621809 287 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC005858.3-201ENST00000624756 589 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms