Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 AC234781.4-201ENST00000419384 244 ntBASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 HMGB3P22-202ENST00000451823 572 ntBASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 RNA5SP208-201ENST00000516156 78 ntBASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 OR7E13P-201ENST00000526052 910 ntBASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 AL391497.1-201ENST00000608671 547 ntBASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 MIR486-1-201ENST00000612171 68 ntBASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 AC119674.1-207ENST00000641355 633 ntBASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
KIAA1549Q9HCM3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 OR10J6P-201ENST00000289731 930 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 RPL7P60-201ENST00000397636 735 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 SNORA57.3-201ENST00000411095 141 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 OR51A6P-201ENST00000418680 1004 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 RPL7P4-203ENST00000430239 730 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 HMGB1P16-201ENST00000447155 540 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 UBE2CP3-201ENST00000502715 450 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 RNU1-95P-201ENST00000516357 160 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 RNU1-128P-201ENST00000516704 160 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 AF186190.1-201ENST00000517470 480 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 PAICSP4-201ENST00000517543 1253 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 AL034408.1-202ENST00000636088 415 ntBASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
KIAA1549Q9HCM3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 MIR448-201ENST00000362131 111 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 GCNT6-201ENST00000379591 934 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 AC004552.1-201ENST00000419089 348 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 AC018644.1-201ENST00000429934 551 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 RPS26P3-201ENST00000470205 348 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 AC090543.2-201ENST00000483963 348 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 AC004057.1-201ENST00000485827 348 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 FCF1P3-201ENST00000496394 590 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 SOD1P3-201ENST00000518682 454 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 SUMO2P20-201ENST00000520803 283 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 BNIP3P33-201ENST00000598912 569 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 AC091905.1-201ENST00000624400 311 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 MTND5P23-201ENST00000430812 1655 ntBASIC3.4□□□□□ -1.87
KIAA1549Q9HCM3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 AC233968.1-201ENST00000611212 1300 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 RNU6-761P-201ENST00000384148 107 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 MIR490-201ENST00000384865 128 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 AL391219.1-201ENST00000422570 483 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 RPS12P5-201ENST00000423449 371 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 VN1R25P-201ENST00000443385 738 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 VN1R40P-201ENST00000455196 941 ntBASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.39□□□□□ -1.87
KIAA1549Q9HCM3 RPS3AP50-201ENST00000487064 803 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms