Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL645608.4-201ENST00000423619 154 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP88Q99567 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP88Q99567 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.64□□□□□ -1.51
NUP88Q99567 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP88Q99567 SEPT7P5-201ENST00000434048 306 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AC092013.1-201ENST00000438795 332 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 USP9YP22-201ENST00000438971 294 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 ELOCP10-201ENST00000440624 327 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 RPL23AP76-201ENST00000441860 458 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AC004865.1-201ENST00000442276 1003 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP88Q99567 CEACAMP6-201ENST00000452007 574 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP88Q99567 VPS26AP1-201ENST00000483197 979 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 RPS27P23-201ENST00000487608 251 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP88Q99567 OR5H4P-201ENST00000510851 923 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP88Q99567 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP88Q99567 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP88Q99567 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP88Q99567 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP88Q99567 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP88Q99567 AC005412.1-201ENST00000580812 1049 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AC022726.1-201ENST00000587475 207 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP88Q99567 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP88Q99567 AC010487.1-201ENST00000594408 1172 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP88Q99567 AL353778.1-201ENST00000603149 408 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 ELOCP34-201ENST00000604436 327 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AC069545.1-201ENST00000605671 358 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP88Q99567 AC107075.1-201ENST00000613695 314 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP88Q99567 AC022031.1-201ENST00000585985 2593 ntBASIC5.64□□□□□ -1.51
NUP88Q99567 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP88Q99567 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP88Q99567 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP88Q99567 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP88Q99567 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP88Q99567 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NUP88Q99567 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP88Q99567 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NUP88Q99567 RNU1-32P-201ENST00000363937 159 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP88Q99567 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 PAICSP7-201ENST00000419829 962 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 AC006960.1-201ENST00000419980 153 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 MRPS36P1-201ENST00000421291 307 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 MTCO1P54-201ENST00000430139 712 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP88Q99567 RPL35AP21-201ENST00000437667 333 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 ANKRD26P4-201ENST00000455755 950 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 AC010326.1-201ENST00000462726 602 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 SCARNA22-201ENST00000503991 125 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 AC048346.1-201ENST00000510247 144 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 NDUFB4P12-201ENST00000513465 390 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 RNU2-30P-201ENST00000516209 141 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 C1GALT1P3-201ENST00000522049 819 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 AC133555.2-201ENST00000550213 292 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP88Q99567 AC123786.2-201ENST00000603459 275 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 DPRXP5-201ENST00000604662 539 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 AP004247.3-201ENST00000608682 624 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP88Q99567 AC131159.1-201ENST00000621854 213 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NUP88Q99567 AP000756.2-201ENST00000624168 2567 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
NUP88Q99567 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP88Q99567 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP88Q99567 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP88Q99567 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP88Q99567 AL353743.4-201ENST00000422653 1547 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
NUP88Q99567 AC011447.7-201ENST00000624228 1590 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP88Q99567 AC025574.1-201ENST00000554784 1653 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 AC134882.1-201ENST00000603738 1676 ntBASIC5.63□□□□□ -1.51
NUP88Q99567 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP88Q99567 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP88Q99567 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP88Q99567 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP88Q99567 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP88Q99567 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP88Q99567 Y_RNA.192-201ENST00000363977 102 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 AC114755.2-201ENST00000413520 361 ntBASIC5.62□□□□□ -1.51
NUP88Q99567 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP88Q99567 BX510359.2-201ENST00000417920 305 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms