Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 EIF3FP1-201ENST00000613970 806 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC022509.4-201ENST00000621404 572 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 MAPK10-304ENST00000641341 3984 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.96□□□□□ -1.61
VPS50Q96JG6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
VPS50Q96JG6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS50Q96JG6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS50Q96JG6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AP000526.1-201ENST00000603308 1388 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC011155.1-201ENST00000316512 456 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 RNU6-304P-201ENST00000364855 107 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 MIR16-1-201ENST00000385271 89 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 RPS24P12-201ENST00000402084 394 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 AL589647.1-201ENST00000402485 466 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC007435.1-201ENST00000421086 415 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 RPL7P44-201ENST00000424827 742 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 THAP5P1-201ENST00000439089 262 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 CBX1P4-201ENST00000439415 457 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 UBE2D3P4-201ENST00000441973 436 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 YWHAQP9-201ENST00000445891 512 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 RSL24D1P3-201ENST00000449255 495 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 RPL21P134-201ENST00000453468 483 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AL161747.1-201ENST00000480068 358 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS50Q96JG6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 RNU6-759P-201ENST00000516740 103 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 ELOCP32-201ENST00000548625 324 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC011840.5-201ENST00000582125 771 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AL353726.1-201ENST00000614041 1000 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS50Q96JG6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS50Q96JG6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 SGO1P1-201ENST00000603525 1447 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 AC023421.1-201ENST00000590535 1785 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 AP000776.1-201ENST00000530032 1663 ntBASIC4.96□□□□□ -1.62
VPS50Q96JG6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS50Q96JG6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS50Q96JG6 SGO1P2-201ENST00000429458 1589 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC092747.4-201ENST00000620519 1861 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC019155.1-201ENST00000382242 574 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 GSTA8P-201ENST00000404253 637 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 NUDT19P3-201ENST00000404698 555 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 RNA5SP80-201ENST00000410475 111 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 RNU6-603P-201ENST00000411403 107 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 NRBF2P2-201ENST00000413087 861 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC048351.1-201ENST00000420064 602 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC007394.1-201ENST00000421941 531 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 DDX39BP1-205ENST00000422507 192 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms