Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC008083.4-201ENST00000615076 444 ntBASIC6.08□□□□□ -1.44
DDX11Q96FC9 FRG1HP-204ENST00000617940 757 ntBASIC6.08□□□□□ -1.44
DDX11Q96FC9 AC011815.3-201ENST00000624194 473 ntBASIC6.08□□□□□ -1.44
DDX11Q96FC9 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.08□□□□□ -1.44
DDX11Q96FC9 AC092747.4-201ENST00000620519 1861 ntBASIC6.08□□□□□ -1.44
DDX11Q96FC9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.08□□□□□ -1.44
DDX11Q96FC9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DDX11Q96FC9 AP005432.1-201ENST00000580891 3485 ntBASIC6.08□□□□□ -1.44
DDX11Q96FC9 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX11Q96FC9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DDX11Q96FC9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 AC083843.2-201ENST00000568248 6253 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 RNA5SP90-201ENST00000364801 99 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 Y_RNA.359-201ENST00000365498 102 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 RPL21P67-201ENST00000402896 478 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 PGBD4P8-201ENST00000412993 562 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 Z80107.2-201ENST00000445127 392 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 HIGD1AP8-201ENST00000453927 274 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 CDC42P1-201ENST00000456658 548 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 snoU13.20-201ENST00000459180 104 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 AC006427.1-201ENST00000514359 712 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 AP000619.3-201ENST00000535634 1127 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 AC040958.1-201ENST00000561102 201 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 CYP2C60P-201ENST00000566088 139 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 AC006539.2-201ENST00000601729 572 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 EIF3FP1-201ENST00000613970 806 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
DDX11Q96FC9 PCAT14-202ENST00000627127 3935 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 AC004520.1-201ENST00000608362 1413 ntBASIC6.07□□□□□ -1.44
DDX11Q96FC9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
DDX11Q96FC9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DDX11Q96FC9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AL022322.2-201ENST00000624072 20397 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC006210.2-201ENST00000367074 1545 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 SCARNA15-201ENST00000607520 4325 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DDX11Q96FC9 Y_RNA.88-201ENST00000363029 99 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 EI24P3-201ENST00000399046 1062 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 AL136131.1-201ENST00000406079 803 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 HMGB3P18-201ENST00000406327 590 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 RN7SKP16-201ENST00000410180 299 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 CDK8P2-201ENST00000415020 547 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DDX11Q96FC9 RPL23AP4-201ENST00000427757 463 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 MTCO1P52-201ENST00000433928 531 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 CDC27P1-201ENST00000445384 715 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC092647.2-201ENST00000452998 253 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 RPL5P32-201ENST00000454085 879 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 HSPE1P22-201ENST00000456856 327 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC021205.1-201ENST00000468797 348 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC091959.2-201ENST00000477363 321 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC113430.1-201ENST00000506872 718 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.06□□□□□ -1.44
DDX11Q96FC9 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DDX11Q96FC9 MIR3934-201ENST00000579806 107 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 AC104785.1-201ENST00000603220 588 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 MTCYBP22-201ENST00000603788 447 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DDX11Q96FC9 AL359314.1-201ENST00000616913 261 ntBASIC6.06□□□□□ -1.44
DDX11Q96FC9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms