Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S1Q92572 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.42□□□□□ -1.86
AP3S1Q92572 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S1Q92572 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.42□□□□□ -1.86
AP3S1Q92572 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.42□□□□□ -1.86
AP3S1Q92572 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S1Q92572 AL138878.2-201ENST00000440581 1241 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S1Q92572 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3S1Q92572 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
AP3S1Q92572 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3S1Q92572 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S1Q92572 RPL38P1-201ENST00000460914 211 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 RPL7P48-201ENST00000461513 746 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AC005532.2-201ENST00000467154 373 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 RPL12P20-201ENST00000475538 479 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 RN7SL741P-201ENST00000482473 289 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AC083982.1-201ENST00000485679 344 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AC147055.3-201ENST00000510547 851 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AC023141.12-201ENST00000512399 199 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
AP3S1Q92572 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S1Q92572 HIGD1AP10-201ENST00000527837 282 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AP004242.1-201ENST00000533701 349 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S1Q92572 AC084783.1-201ENST00000565846 910 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.42□□□□□ -1.86
AP3S1Q92572 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S1Q92572 NF1P5-201ENST00000588287 448 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AC011492.1-201ENST00000600023 315 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AL592436.1-201ENST00000605135 558 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 AC026124.2-201ENST00000621847 656 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.42□□□□□ -1.86
AP3S1Q92572 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S1Q92572 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
AP3S1Q92572 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S1Q92572 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
AP3S1Q92572 OR56B2P-202ENST00000641377 2453 ntBASIC3.42□□□□□ -1.86
AP3S1Q92572 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
AP3S1Q92572 AL158163.1-201ENST00000603915 1649 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.41□□□□□ -1.86
AP3S1Q92572 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3S1Q92572 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP3S1Q92572 RNU4-25P-201ENST00000410569 230 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 AL590806.1-201ENST00000415818 853 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 LIPT1P1-201ENST00000415870 1186 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.41□□□□□ -1.86
AP3S1Q92572 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
AP3S1Q92572 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
AP3S1Q92572 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.41□□□□□ -1.86
AP3S1Q92572 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.41□□□□□ -1.86
AP3S1Q92572 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.41□□□□□ -1.86
AP3S1Q92572 AL353898.1-201ENST00000444055 238 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.41□□□□□ -1.86
AP3S1Q92572 CEACAMP6-201ENST00000452007 574 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 RPS20P32-201ENST00000456044 356 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 RN7SL98P-201ENST00000462271 300 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 RN7SL330P-201ENST00000469709 307 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 AC022336.1-201ENST00000475510 337 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 RPL7P51-201ENST00000490532 749 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 RPS27AP16-201ENST00000492222 470 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 RN7SL810P-201ENST00000493031 276 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.41□□□□□ -1.86
AP3S1Q92572 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
AP3S1Q92572 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.41□□□□□ -1.86
AP3S1Q92572 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.41□□□□□ -1.86
AP3S1Q92572 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.41□□□□□ -1.86
AP3S1Q92572 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.41□□□□□ -1.86
AP3S1Q92572 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3S1Q92572 RNA5SP49-201ENST00000516450 115 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 RN7SKP82-201ENST00000516786 223 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.41□□□□□ -1.86
AP3S1Q92572 PDCL2P2-201ENST00000533651 189 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3S1Q92572 AC106785.3-201ENST00000564064 847 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 AC243654.2-201ENST00000612843 443 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 AC008121.2-201ENST00000614647 523 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 XIST_intron.1-201ENST00000619444 68 ntBASIC3.41□□□□□ -1.86
AP3S1Q92572 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3S1Q92572 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
AP3S1Q92572 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3S1Q92572 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP3S1Q92572 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3S1Q92572 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
AP3S1Q92572 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.41□□□□□ -1.86
AP3S1Q92572 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP3S1Q92572 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.86
AP3S1Q92572 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
AP3S1Q92572 AL592494.2-201ENST00000425455 1548 ntBASIC3.4□□□□□ -1.86
AP3S1Q92572 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
AP3S1Q92572 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
AP3S1Q92572 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.4□□□□□ -1.87
AP3S1Q92572 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP3S1Q92572 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
AP3S1Q92572 RNA5SP443-201ENST00000363083 132 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP3S1Q92572 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
AP3S1Q92572 MIR621-201ENST00000384919 96 ntBASIC3.4□□□□□ -1.87
AP3S1Q92572 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms