Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 AC135352.1-201ENST00000506173 1418 ntBASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 KARSP3-201ENST00000571212 1504 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 MFSD8-239ENST00000641590 2479 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC011155.1-201ENST00000316512 456 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 RN7SKP115-201ENST00000363177 317 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC016769.3-201ENST00000396562 315 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 SSXP10-201ENST00000402595 565 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 VN1R8P-201ENST00000407739 893 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 MIR320C1-201ENST00000408566 88 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 RN7SKP279-201ENST00000411383 298 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AL158073.1-201ENST00000426848 1104 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 OR52J1P-201ENST00000450596 932 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC091685.2-201ENST00000454924 864 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 DNAJC19P1-201ENST00000455312 319 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 TRBV26-201ENST00000456572 344 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 CFTRP1-201ENST00000456646 183 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC022447.1-201ENST00000515358 464 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 NMNAT1P5-201ENST00000559657 841 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC012414.6-201ENST00000568241 401 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 RN7SL802P-201ENST00000577858 299 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC008759.1-201ENST00000589783 983 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 TAS2R6P-201ENST00000605022 826 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC005084.1-201ENST00000605160 304 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC099842.1-201ENST00000619919 596 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC015908.5-201ENST00000623289 343 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AL356121.2-201ENST00000624715 780 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 AC006210.2-201ENST00000367074 1545 ntBASIC5.64□□□□□ -1.51
SYNPOQ8N3V7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 HSPA8P14-201ENST00000552265 1805 ntBASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 U3.10-201ENST00000364459 214 ntBASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 RNU6-1226P-201ENST00000384317 107 ntBASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 RPS3AP9-201ENST00000417027 792 ntBASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 AC004448.2-201ENST00000422360 586 ntBASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 FABP7P2-201ENST00000429946 379 ntBASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 SNRPEP7-201ENST00000438350 220 ntBASIC5.63□□□□□ -1.51
SYNPOQ8N3V7 AC073850.1-201ENST00000449243 255 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms