Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL590609.2-201ENST00000421430 368 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 HMGB1P45-201ENST00000435986 653 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 RPS26P30-201ENST00000443431 335 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 MTND1P33-201ENST00000446251 917 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 MRPL35P4-201ENST00000453682 566 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 RN7SL604P-201ENST00000492589 296 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 RN7SL558P-201ENST00000497468 299 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AL132857.1-201ENST00000555180 708 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AC105129.1-201ENST00000560250 297 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 NIFKP8-201ENST00000560500 874 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 CCDC58P3-201ENST00000590792 430 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AC090948.1-201ENST00000607464 549 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AC123767.1-202ENST00000620407 817 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AC025263.3-201ENST00000622965 1396 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AL672167.1-204ENST00000641875 3017 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AC138393.1-206ENST00000540997 1886 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 OR14L1P-202ENST00000641545 3009 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 RNU6-146P-201ENST00000384602 108 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AL449283.1-202ENST00000418249 604 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 OR6C64P-201ENST00000419708 825 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AL356387.2-201ENST00000422272 243 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 RPL7P57-201ENST00000423238 740 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC063976.2-201ENST00000425667 3556 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 MTCYBP32-201ENST00000427945 1084 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 RPL34P6-201ENST00000432390 345 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AL035246.1-201ENST00000433554 1255 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC073052.1-201ENST00000440417 714 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 GTF3AP5-201ENST00000442645 697 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 H2AFZP5-201ENST00000446960 382 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 NUTF2P3-201ENST00000448540 384 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 NPM1P13-201ENST00000452663 865 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC118282.2-201ENST00000508739 374 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 RPL7L1P13-201ENST00000511702 739 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 Y_RNA.719-201ENST00000517156 106 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 MIR2116-201ENST00000517221 80 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC139103.1-201ENST00000534696 1030 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AL122126.1-201ENST00000546905 1318 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AL109659.3-201ENST00000624985 950 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 CASC19-204ENST00000641001 2055 ntBASIC5.1□□□□□ -1.59
HERC6Q8IVU3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.1□□□□□ -1.59
HERC6Q8IVU3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AL022393.1-201ENST00000625142 1677 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms