Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MAPK10-365ENST00000641902 3825 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC007529.1-201ENST00000418574 2178 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 XGY1-201ENST00000381172 446 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 SNORD115-47-201ENST00000391226 86 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 RPL17P50-201ENST00000396131 546 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 RN7SKP29-201ENST00000410957 272 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 RNU2-41P-201ENST00000410991 178 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 SPA17P1-201ENST00000416656 452 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 NUP35P2-201ENST00000416748 943 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC245054.1-201ENST00000420944 258 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AL355433.1-201ENST00000422804 300 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC099677.3-201ENST00000427081 395 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 HMGB1P31-201ENST00000437242 427 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 EEF1B2P6-201ENST00000445713 673 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC002381.1-201ENST00000447049 280 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 BX322784.1-201ENST00000455793 1077 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC090142.1-201ENST00000465776 462 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC022215.1-201ENST00000481770 362 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC013356.1-201ENST00000489027 564 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 RNF138P1-201ENST00000502765 546 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 FAM92A1P2-202ENST00000504766 877 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC091133.4-201ENST00000511142 308 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 SNORA43.3-201ENST00000517240 103 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 UBE2FP2-201ENST00000566646 462 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 LARP7P2-201ENST00000575306 125 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC053481.3-201ENST00000577881 843 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC145423.1-201ENST00000605712 336 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AL121757.2-201ENST00000611223 313 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AL592295.2-201ENST00000612578 206 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC009704.2-201ENST00000618739 483 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 MIR6719-201ENST00000622428 87 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 CU639417.4-201ENST00000623928 207 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 MTND1P37-201ENST00000636562 264 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 AC092111.1-201ENST00000618256 3358 ntBASIC6.4□□□□□ -1.38
NPAS4Q8IUM7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 AC005618.1-201ENST00000606901 3148 ntBASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 AC107027.3-201ENST00000565095 3473 ntBASIC6.4□□□□□ -1.39
NPAS4Q8IUM7 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 AC073365.1-203ENST00000641055 1992 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 AL662795.2-201ENST00000624252 3706 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 OR9K1P-201ENST00000326513 941 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 RN7SKP162-201ENST00000363605 345 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 SNORD115.1-201ENST00000391109 76 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 AC009480.2-201ENST00000422916 432 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 AC233728.2-201ENST00000425348 757 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 USP24P1-201ENST00000433802 779 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 ARPC3P1-201ENST00000437218 533 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 RSU1P2-202ENST00000437884 485 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 AC112653.1-201ENST00000443851 386 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 EIF4A1P11-201ENST00000451239 222 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 MTCO1P42-201ENST00000457379 726 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 snoU13.7-201ENST00000459220 104 ntBASIC6.39□□□□□ -1.39
NPAS4Q8IUM7 HMGN1P10-201ENST00000474557 553 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms