Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHA9Q7RTU4 AC010266.2-201ENST00000564741 3255 ntBASIC4.8□□□□□ -1.64
BHLHA9Q7RTU4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHA9Q7RTU4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.8□□□□□ -1.64
BHLHA9Q7RTU4 AC092111.2-201ENST00000611627 1414 ntBASIC4.8□□□□□ -1.64
BHLHA9Q7RTU4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHA9Q7RTU4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHA9Q7RTU4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 PROS2P-201ENST00000474651 1951 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 Y_RNA.41-201ENST00000362646 102 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 RNU6-692P-201ENST00000384496 107 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AL356131.1-201ENST00000405826 414 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 ZNF602P-201ENST00000405929 924 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 RN7SKP97-201ENST00000410966 333 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AL807761.1-201ENST00000417622 171 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 UQCRBP1-201ENST00000421129 336 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 RPL36AP10-201ENST00000421785 322 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC073464.3-201ENST00000422564 712 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 Z74021.1-201ENST00000423610 407 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 MTCO3P38-201ENST00000468910 766 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 RPL5P16-201ENST00000471467 790 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC069304.1-201ENST00000491593 704 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC098799.3-201ENST00000506095 438 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AP003355.1-201ENST00000518956 587 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 MIR5096-201ENST00000583713 70 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 MIR4715-201ENST00000584117 79 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 RPL12P25-202ENST00000598100 674 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AL136363.2-201ENST00000604173 851 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AL136295.6-201ENST00000610486 658 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC010133.1-201ENST00000615809 842 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC018926.1-201ENST00000616335 435 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AP003400.2-201ENST00000624036 666 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 MTND5P42-201ENST00000637720 498 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AC003985.2-201ENST00000562268 1669 ntBASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
BHLHA9Q7RTU4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 OR56B2P-202ENST00000641377 2453 ntBASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 OR56B2P-201ENST00000317102 954 ntBASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 RNU6-1214P-201ENST00000363650 109 ntBASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 RNU1-32P-201ENST00000363937 159 ntBASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 RNA5SP151-201ENST00000365632 117 ntBASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 AL021407.1-201ENST00000404531 386 ntBASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 AP001324.1-201ENST00000428553 399 ntBASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 VN1R25P-201ENST00000443385 738 ntBASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 H2AFZP6-201ENST00000444403 394 ntBASIC4.78□□□□□ -1.64
BHLHA9Q7RTU4 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms