Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC007954.1-201ENST00000554198 494 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC009101.1-201ENST00000568135 242 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC008945.2-201ENST00000606056 604 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AL158211.4-201ENST00000606988 584 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 FAM25E-202ENST00000608562 189 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AL121890.2-201ENST00000617644 465 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 RMST_5.1-201ENST00000618704 126 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC091953.3-201ENST00000623220 236 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 AC015726.3-201ENST00000624501 418 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 AC068870.1-201ENST00000563737 2455 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP39Q53GS9 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP39Q53GS9 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
USP39Q53GS9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.41□□□□□ -1.54
USP39Q53GS9 TRIM51GP-201ENST00000534741 1350 ntBASIC5.41□□□□□ -1.54
USP39Q53GS9 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.41□□□□□ -1.54
USP39Q53GS9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
USP39Q53GS9 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP39Q53GS9 AC000367.1-201ENST00000452711 1766 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP39Q53GS9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP39Q53GS9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
USP39Q53GS9 Y_RNA.70-201ENST00000362886 110 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 RNU6-560P-201ENST00000364007 108 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 RNU6-31P-201ENST00000384388 108 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 RNU6-114P-201ENST00000384704 105 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 TPMTP3-201ENST00000411928 735 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.4□□□□□ -1.54
USP39Q53GS9 AL133482.1-201ENST00000415988 498 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 TAF13P2-201ENST00000416876 286 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 Z99497.1-201ENST00000421282 135 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 OR6K4P-201ENST00000423179 955 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 CYCSP46-201ENST00000423569 204 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.4□□□□□ -1.54
USP39Q53GS9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.4□□□□□ -1.54
USP39Q53GS9 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.4□□□□□ -1.54
USP39Q53GS9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.4□□□□□ -1.54
USP39Q53GS9 MTCO1P48-201ENST00000448024 1096 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.4□□□□□ -1.54
USP39Q53GS9 Z92846.1-201ENST00000456203 268 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 RPS3AP41-201ENST00000462701 778 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 RPL31P58-201ENST00000469001 379 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 NCOR1P1-202ENST00000486162 291 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 OR4G11P-201ENST00000492842 939 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.4□□□□□ -1.54
USP39Q53GS9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.4□□□□□ -1.54
USP39Q53GS9 RNU6-718P-201ENST00000516166 105 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 AC018442.3-201ENST00000523025 183 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 AC079171.1-201ENST00000568788 914 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
USP39Q53GS9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.4□□□□□ -1.54
USP39Q53GS9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
USP39Q53GS9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
USP39Q53GS9 AC008507.1-201ENST00000587506 734 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.4□□□□□ -1.54
USP39Q53GS9 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.4□□□□□ -1.54
USP39Q53GS9 AC007038.2-201ENST00000608095 740 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 AL139124.1-201ENST00000609123 421 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 AC128687.2-201ENST00000609657 566 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 U4.5-201ENST00000617137 123 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.4□□□□□ -1.54
USP39Q53GS9 AP001005.3-201ENST00000622049 129 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 PCMTD1P7-201ENST00000634506 357 ntBASIC5.4□□□□□ -1.54
USP39Q53GS9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP39Q53GS9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.4□□□□□ -1.55
USP39Q53GS9 AC011477.1-204ENST00000623416 1325 ntBASIC5.4□□□□□ -1.55
USP39Q53GS9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP39Q53GS9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP39Q53GS9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP39Q53GS9 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.4□□□□□ -1.55
USP39Q53GS9 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
USP39Q53GS9 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP39Q53GS9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP39Q53GS9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
USP39Q53GS9 PANDAR-201ENST00000629595 1506 ntBASIC5.39□□□□□ -1.55
USP39Q53GS9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
USP39Q53GS9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.39□□□□□ -1.55
USP39Q53GS9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP39Q53GS9 SNORA70.6-201ENST00000383934 134 ntBASIC5.39□□□□□ -1.55
USP39Q53GS9 MIR105-1-201ENST00000385222 81 ntBASIC5.39□□□□□ -1.55
USP39Q53GS9 CEACAMP8-201ENST00000413902 580 ntBASIC5.39□□□□□ -1.55
USP39Q53GS9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.39□□□□□ -1.55
USP39Q53GS9 AL022400.1-201ENST00000423946 935 ntBASIC5.39□□□□□ -1.55
USP39Q53GS9 AC104837.2-201ENST00000427236 424 ntBASIC5.39□□□□□ -1.55
USP39Q53GS9 AC092017.2-201ENST00000427600 362 ntBASIC5.39□□□□□ -1.55
USP39Q53GS9 LARP1BP3-201ENST00000437229 869 ntBASIC5.39□□□□□ -1.55
USP39Q53GS9 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP39Q53GS9 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.39□□□□□ -1.55
USP39Q53GS9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms